| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54027408
Identifier: 54027408
GI number: 54027408
Start: 5753497
End: 5754843
Strand: Reverse
Name: 54027408
Synonym: nfa54340
Alternate gene names: NA
Gene position: 5754843-5753497 (Counterclockwise)
Preceding gene: 54027410
Following gene: 54027407
Centisome position: 95.58
GC content: 72.68
Gene sequence:
>1347_bases GTGATCGGTGCCGGCCAGACCGGCGTCACCGCGGCGCTGGGCCTCCTCGACGCAGGATTCGAGGTGACCCTCTACAGCGA GCGCGATCAGCGCGCGCTGCGCGACGACGTGCCCGCCACCGGCACGGCGCTCGAATTCGGTGAGACCCAGCAGGCCGAGG CCGCGCTCGGCCTCGACACCTACACCGCCCGCGCGCCTCGGCACACCGGATTGAGCGTCCGCATCGCCGGGCCTGGGCCC GAGCGGCCCGAACTCATCCAGTTCGACGGGCATTTCGACGGTTACGTCGGCGTCGCGGTGGACACCCGGCTCAAGGCCGA CGAGCGGCTGACCGCCTTCCAGGAGCGCGGCGGCCGCTTCGTCGTCGAGCAGGTGACGCTGGAGACCATCGACAAGGTCG CGGCCGACGCCGATCTCACCCTGGTGGCCACCGGCCGCGGCGGGCTGTCGGAACTGTTCCCGATCGACGAGTCCCGCACC GTCTACGACGCACCGCAGCGCTCGCTGCTCACGGTCACCGTGACCGGTCTCGGCCACGACGAGCACGTCTTCGCCCACCG CAGCAAGGCGGGTGGCGCGCACAGCGGCTTCTCGATCCTGGCCGACCAGGGCGAGGGCTGGTGGGGCCCCTACCTGCACA AGGACGCGGGCCCGAGCTGGGCGTTCCTGGGCTGGGCGCGGCCGGGTAGCGAGTGGGAGCAGCGGTTCGCGACGGCCGAT TCGGCGGAGTCGGCCCTCGGGGTGGTGCGCGAGCTCTACCGCGACTACATCGACTGGGATCTGCCCGAGGTGCTGGCCGC CCGCACCATCGCGGAGGACCCGCATTCGTGGTTGAAGGGCGCGGTCCGCCCGGTGGTGCGGGTCGGTGTGGGTCGCACCG CGCAGGGGCACGCGGTCGCCGCCCTTGGCGACACCGCGGTGGCCTACGACCCGATCGCCGGGCAGGGCGCGCAGAGCGGG CTCATCCAGGCGCAGCGGCTGGTCGCGGCGGCGGCCGTGCACGACGGCCCGTTCGACGAGCAGTGGCTGCGTGACCGCTA CACCGAGTTCCTGGCCGCTCGCAGCGACGCCGCGAGCAAGGTGACCAGGCTGTTCCTCAGCGACCCGGAGTTCGGCGAGA TCGGCAACAAGTTCTTCGCCGCCGCGGCCGTCGAGCCGCGCTTCGCCTCGGCGCTGGTGGGTCTGCTGCACCGTCCGCAA CCGTTCCTCGGGATCGATTCCCCCGAGGCCGCCGACGCCTACATCACCCAGGTGACCGGCGTCGAGGCCGGCGAACTGCT GGCCCGATTCGCTCCCGCGGGCCGGTTCACCCGGTCGGCCTTCGCGGACGCGCTCGCCACGAGCTGA
Upstream 100 bases:
>100_bases GTTCTCGTTGATCGCAATACTCCGATCGCGGCGGCGCGCATCGCACCATCCCTGCATGACATCCACGAATCCCGTTTCCC GTTCCACCCGTAAGGCGGCG
Downstream 100 bases:
>100_bases GCCCGTCGGGCGCCCGTCGTGCGGCGGGCGCCCGATCGGATCGCACCGATTCAAACCCTCCCTTCTCCTCGCCGTCGCGT GTTGCATGACCGACGACGAG
Product: putative monooxygenase
Products: NA
Alternate protein names: Oxygenase Subunit; Oxidoreductase; Oxygenase; Monooxygenase; Dehydrogenase/Oxygenase Subunit; FAD Dependent Oxidoreductase; FAD-Dependent Oxiredutase; Styrene Monooxygenase; Monooxygenase Component B; Monooxygenase Subunit
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MIGAGQTGVTAALGLLDAGFEVTLYSERDQRALRDDVPATGTALEFGETQQAEAALGLDTYTARAPRHTGLSVRIAGPGP ERPELIQFDGHFDGYVGVAVDTRLKADERLTAFQERGGRFVVEQVTLETIDKVAADADLTLVATGRGGLSELFPIDESRT VYDAPQRSLLTVTVTGLGHDEHVFAHRSKAGGAHSGFSILADQGEGWWGPYLHKDAGPSWAFLGWARPGSEWEQRFATAD SAESALGVVRELYRDYIDWDLPEVLAARTIAEDPHSWLKGAVRPVVRVGVGRTAQGHAVAALGDTAVAYDPIAGQGAQSG LIQAQRLVAAAAVHDGPFDEQWLRDRYTEFLAARSDAASKVTRLFLSDPEFGEIGNKFFAAAAVEPRFASALVGLLHRPQ PFLGIDSPEAADAYITQVTGVEAGELLARFAPAGRFTRSAFADALATS
Sequences:
>Translated_448_residues MIGAGQTGVTAALGLLDAGFEVTLYSERDQRALRDDVPATGTALEFGETQQAEAALGLDTYTARAPRHTGLSVRIAGPGP ERPELIQFDGHFDGYVGVAVDTRLKADERLTAFQERGGRFVVEQVTLETIDKVAADADLTLVATGRGGLSELFPIDESRT VYDAPQRSLLTVTVTGLGHDEHVFAHRSKAGGAHSGFSILADQGEGWWGPYLHKDAGPSWAFLGWARPGSEWEQRFATAD SAESALGVVRELYRDYIDWDLPEVLAARTIAEDPHSWLKGAVRPVVRVGVGRTAQGHAVAALGDTAVAYDPIAGQGAQSG LIQAQRLVAAAAVHDGPFDEQWLRDRYTEFLAARSDAASKVTRLFLSDPEFGEIGNKFFAAAAVEPRFASALVGLLHRPQ PFLGIDSPEAADAYITQVTGVEAGELLARFAPAGRFTRSAFADALATS >Mature_448_residues MIGAGQTGVTAALGLLDAGFEVTLYSERDQRALRDDVPATGTALEFGETQQAEAALGLDTYTARAPRHTGLSVRIAGPGP ERPELIQFDGHFDGYVGVAVDTRLKADERLTAFQERGGRFVVEQVTLETIDKVAADADLTLVATGRGGLSELFPIDESRT VYDAPQRSLLTVTVTGLGHDEHVFAHRSKAGGAHSGFSILADQGEGWWGPYLHKDAGPSWAFLGWARPGSEWEQRFATAD SAESALGVVRELYRDYIDWDLPEVLAARTIAEDPHSWLKGAVRPVVRVGVGRTAQGHAVAALGDTAVAYDPIAGQGAQSG LIQAQRLVAAAAVHDGPFDEQWLRDRYTEFLAARSDAASKVTRLFLSDPEFGEIGNKFFAAAAVEPRFASALVGLLHRPQ PFLGIDSPEAADAYITQVTGVEAGELLARFAPAGRFTRSAFADALATS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47869; Mature: 47869
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGAGQTGVTAALGLLDAGFEVTLYSERDQRALRDDVPATGTALEFGETQQAEAALGLDT CCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCH YTARAPRHTGLSVRIAGPGPERPELIQFDGHFDGYVGVAVDTRLKADERLTAFQERGGRF HHCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCEE VVEQVTLETIDKVAADADLTLVATGRGGLSELFPIDESRTVYDAPQRSLLTVTVTGLGHD EEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCEEECCCCCEEEEEEEEECCCC EHVFAHRSKAGGAHSGFSILADQGEGWWGPYLHKDAGPSWAFLGWARPGSEWEQRFATAD CHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCC SAESALGVVRELYRDYIDWDLPEVLAARTIAEDPHSWLKGAVRPVVRVGVGRTAQGHAVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEE ALGDTAVAYDPIAGQGAQSGLIQAQRLVAAAAVHDGPFDEQWLRDRYTEFLAARSDAASK EECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VTRLFLSDPEFGEIGNKFFAAAAVEPRFASALVGLLHRPQPFLGIDSPEAADAYITQVTG HHHHHCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC VEAGELLARFAPAGRFTRSAFADALATS CCHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIGAGQTGVTAALGLLDAGFEVTLYSERDQRALRDDVPATGTALEFGETQQAEAALGLDT CCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHHHCCCH YTARAPRHTGLSVRIAGPGPERPELIQFDGHFDGYVGVAVDTRLKADERLTAFQERGGRF HHCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCEE VVEQVTLETIDKVAADADLTLVATGRGGLSELFPIDESRTVYDAPQRSLLTVTVTGLGHD EEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCEEECCCCCEEEEEEEEECCCC EHVFAHRSKAGGAHSGFSILADQGEGWWGPYLHKDAGPSWAFLGWARPGSEWEQRFATAD CHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCC SAESALGVVRELYRDYIDWDLPEVLAARTIAEDPHSWLKGAVRPVVRVGVGRTAQGHAVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEE ALGDTAVAYDPIAGQGAQSGLIQAQRLVAAAAVHDGPFDEQWLRDRYTEFLAARSDAASK EECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VTRLFLSDPEFGEIGNKFFAAAAVEPRFASALVGLLHRPQPFLGIDSPEAADAYITQVTG HHHHHCCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC VEAGELLARFAPAGRFTRSAFADALATS CCHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA