| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is fba [H]
Identifier: 54027356
GI number: 54027356
Start: 5689946
End: 5690980
Strand: Reverse
Name: fba [H]
Synonym: nfa53820
Alternate gene names: 54027356
Gene position: 5690980-5689946 (Counterclockwise)
Preceding gene: 54027360
Following gene: 54027355
Centisome position: 94.52
GC content: 66.38
Gene sequence:
>1035_bases GTGCCCATCGCAACCCCCGAGGTCTACGCCGAGATGCTGGCTCGCGCCAAGCAGAACTCCTTCGCGTTCCCGGCGATCAA CTGCACCTCGTCGGAGACCATCAACGCGGCCATCAAGGGCTTCGCCGATGCCGGCAGCGACGGCATCATCCAGTTCTCGA CCGGCGGCGCGGAGTTCGGTTCCGGGCTCGGCGTGAAGGACATGGTCACCGGCGCGGTCGCGCTGGCCGAGTTCGCGCAC GTGGTGGCGGCGAAGTACGACGTGACCATCGCCCTGCACACCGACCACTGCCCGAAGGACAAGCTGGACGGCTTCGTCCG GCCGCTGATCGCCATCTCGCAGGAGCGGGTGAACGCGGGCAAGAACCCGCTGTTCCAGTCGCACATGTGGGACGGCTCGG CCATCCCGATCGACGAAAACCTCGAGATCGCCAAGGAGCTGCTGAAGGCCACCTCGGCGGCCAACATCATCCTCGAGGTC GAGATCGGCGTCGTCGGCGGTGAAGAGGACGGTGTCGAGGCCGAGATCAACGAGAAGCTCTACACCTCCCCGGAGGACTT CGAGAAGACCGTCGACGCGCTGGGCACCGGCGAGAACGGCAAGTACCTGCTCGCCGCCACCTTCGGCAACGTGCACGGCG TGTACAAGCCGGGCAACGTCAAGCTCCGCCCCGAGGTGCTCGCCGAGGGCCAGCGGGTGGCCGCGGCCAAGCTCGGCCTC GGCGCCGACGCGCAGCCGTTCGACTTCGTCTTCCACGGCGGTTCGGGCTCGCTGAAGTCCGAGATCGACGACGCGCTGCG CTACGGCGTGGTGAAGATGAACGTCGACACCGACACCCAGTACGCCTTCACCCGTCCCGTCGCCGGGCACATGTTCACCA ACTACGACGGTGTGCTCAAGATCGACGGCGAGGTCGGCAACAAGAAGACCTACGACCCGCGCAGCTACCTCAAGAAGGCC GAGGCGTCGATGTCGGAGCGCGTCGTGGAGGCGTGCAATGATCTGAAGTCCGCGGGACGGTCGATCAGCGCCTGA
Upstream 100 bases:
>100_bases GGTCCCCTGTCGGGTGGGTCGGCGTCTCCCTTAGGCTGATCAGCAGGATCAGCACCCTTCGCGCCTGCGGGCGGCGAGCG TCGTACATGGAGGTCTGTCA
Downstream 100 bases:
>100_bases CCCACAACGTTCGAGGGCCCGAGCTCATGAGTCTGGATGTGCGTGTGCTCGGGCCCGTCCGGTTGTTCGTCGGTGGTGAG CCGGTGGCGGTCGGCGGGCC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPIATPEVYAEMLARAKQNSFAFPAINCTSSETINAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFAH VVAAKYDVTIALHTDHCPKDKLDGFVRPLIAISQERVNAGKNPLFQSHMWDGSAIPIDENLEIAKELLKATSAANIILEV EIGVVGGEEDGVEAEINEKLYTSPEDFEKTVDALGTGENGKYLLAATFGNVHGVYKPGNVKLRPEVLAEGQRVAAAKLGL GADAQPFDFVFHGGSGSLKSEIDDALRYGVVKMNVDTDTQYAFTRPVAGHMFTNYDGVLKIDGEVGNKKTYDPRSYLKKA EASMSERVVEACNDLKSAGRSISA
Sequences:
>Translated_344_residues MPIATPEVYAEMLARAKQNSFAFPAINCTSSETINAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFAH VVAAKYDVTIALHTDHCPKDKLDGFVRPLIAISQERVNAGKNPLFQSHMWDGSAIPIDENLEIAKELLKATSAANIILEV EIGVVGGEEDGVEAEINEKLYTSPEDFEKTVDALGTGENGKYLLAATFGNVHGVYKPGNVKLRPEVLAEGQRVAAAKLGL GADAQPFDFVFHGGSGSLKSEIDDALRYGVVKMNVDTDTQYAFTRPVAGHMFTNYDGVLKIDGEVGNKKTYDPRSYLKKA EASMSERVVEACNDLKSAGRSISA >Mature_343_residues PIATPEVYAEMLARAKQNSFAFPAINCTSSETINAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFAHV VAAKYDVTIALHTDHCPKDKLDGFVRPLIAISQERVNAGKNPLFQSHMWDGSAIPIDENLEIAKELLKATSAANIILEVE IGVVGGEEDGVEAEINEKLYTSPEDFEKTVDALGTGENGKYLLAATFGNVHGVYKPGNVKLRPEVLAEGQRVAAAKLGLG ADAQPFDFVFHGGSGSLKSEIDDALRYGVVKMNVDTDTQYAFTRPVAGHMFTNYDGVLKIDGEVGNKKTYDPRSYLKKAE ASMSERVVEACNDLKSAGRSISA
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789293, Length=338, Percent_Identity=40.8284023668639, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI87082041, Length=331, Percent_Identity=23.8670694864048, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789526, Length=336, Percent_Identity=27.0833333333333, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788072, Length=266, Percent_Identity=27.4436090225564, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322790, Length=338, Percent_Identity=35.7988165680473, Blast_Score=200, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 36600; Mature: 36468
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIATPEVYAEMLARAKQNSFAFPAINCTSSETINAAIKGFADAGSDGIIQFSTGGAEFG CCCCCHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHC SGLGVKDMVTGAVALAEFAHVVAAKYDVTIALHTDHCPKDKLDGFVRPLIAISQERVNAG CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC KNPLFQSHMWDGSAIPIDENLEIAKELLKATSAANIILEVEIGVVGGEEDGVEAEINEKL CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCC YTSPEDFEKTVDALGTGENGKYLLAATFGNVHGVYKPGNVKLRPEVLAEGQRVAAAKLGL CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEECCCCEEECHHHHCCCCCEEHHHHCC GADAQPFDFVFHGGSGSLKSEIDDALRYGVVKMNVDTDTQYAFTRPVAGHMFTNYDGVLK CCCCCCCEEEEECCCCCHHHHHHHHHHHCEEEEECCCCCCEEEECCCCCCEEECCCCEEE IDGEVGNKKTYDPRSYLKKAEASMSERVVEACNDLKSAGRSISA ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PIATPEVYAEMLARAKQNSFAFPAINCTSSETINAAIKGFADAGSDGIIQFSTGGAEFG CCCCHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHC SGLGVKDMVTGAVALAEFAHVVAAKYDVTIALHTDHCPKDKLDGFVRPLIAISQERVNAG CCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC KNPLFQSHMWDGSAIPIDENLEIAKELLKATSAANIILEVEIGVVGGEEDGVEAEINEKL CCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCC YTSPEDFEKTVDALGTGENGKYLLAATFGNVHGVYKPGNVKLRPEVLAEGQRVAAAKLGL CCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEECCCCEEECHHHHCCCCCEEHHHHCC GADAQPFDFVFHGGSGSLKSEIDDALRYGVVKMNVDTDTQYAFTRPVAGHMFTNYDGVLK CCCCCCCEEEEECCCCCHHHHHHHHHHHCEEEEECCCCCCEEEECCCCCCEEECCCCEEE IDGEVGNKKTYDPRSYLKKAEASMSERVVEACNDLKSAGRSISA ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]