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The map label for this gene is 54027354

Identifier: 54027354

GI number: 54027354

Start: 5687209

End: 5688672

Strand: Reverse

Name: 54027354

Synonym: nfa53800

Alternate gene names: NA

Gene position: 5688672-5687209 (Counterclockwise)

Preceding gene: 54027355

Following gene: 54027351

Centisome position: 94.48

GC content: 70.83

Gene sequence:

>1464_bases
GTGCTGATGGCGGTGCGCATGGCGGCGGTGATCGGTGCCGCGGGATTGCTGGTCGCTGCGCAGGGGGCGGTGGGCTCAGC
CGAGCCCGGCGGCGCGGTCGCGGTGCCCGGCGCCGGGCCGTGTCTCACCGACCCGAAACCGGTGCACGAGGATCTGATTC
CGGAGACGCTCGAGGTGCCCGTTCCGTACCCGGTGGTCACGGTGCTGCCGCCGGAGCCACCCGAGCCGGAGCCGGTGCGC
ACCGAGATGACGTTGCCGAGCGACCCGTGCGTCAACCCCTGCCCGGACCTCACCGACCTGCCGGAACCACCGCCGAGCCT
GGCGAACCGGCTCGGCATTCCCGAGATCCTCGTGAACCCCAAGCCCTTCTATTTCGCGCTGCCCGGTCCGAGCCCCGATC
CCGGCGAGGTGCCGCCCCCACCCGAACCGGTCACCCCACCCACCGAGGCCGCGCCGCGCGAGGCGGCGCCCGCCGCGCCG
CGCGTGGTGCAGGTGCGCGAAGTCGCCAAGCAGACCGGCGCCAACTCGGTGAACCGCACCGACAAGCGGTGGCAGGTGGA
CGGCACCGACCTGGGGATCATGTGGGAGAGCGGGCCCGGGGAGGTCGCGGTGGCGTTCGGCGACACCGTCGGACGCGGGT
TCCACCCGCCCGGCGGCATGGGCGGGGACTGGCGCAGCAATGTGCTGGCCTTCAGTACCGACCGTGACCTGAGCGACGGG
ATGACCTACGACCGCATGGTCACCGACAGTCGCTGCCATGCCGCGGAGGTGCTGTCGAGCCGCAAACTCGACAACGTGGA
GATCACCACCATCCCCACCTCCGGCTTCGCCCTCGGCGACCGGCAGTACCTGAGCTACATGTCGATTCGCACCTGGAACA
GCGGGCCCGGCACCTTCTACACCAACTACGGCGGGATCGCCTACTCCGACGACCGCGGCCAGACCTGGACCAAGGACCCG
CACGCCCGCTGGGACAACATCTTCGGCCTCGCCAACTTCCAGGTGAGCGCGATGGTCCCGCACGGCGACCACGTCTACAT
GTTCGGCACCCCCAACACCCGCCTCGGCGCGGTCGGCCTCGCCCGCGTCCCGGCCGACCAACTGCTCAACAAGACCGCCT
ACCAGTACTGGCGGGACGGGCAGTGGACGCCGGTCGGCGGGGCCGCCAGCGCCACACCCGTCGTCGACGCCCCCGCGGGC
GAGCTGTCGGTGCGCTTCGACGCGAGCCGGGGGGTGTGGCAGATGAGCTACCTCGACACCGCGCGCGCCGCCATCGTCGT
CCGGGAGGCGACCACGCCCCAGGGCGCCTGGTCGGCCCCGACGCCGACGGTCTCGGTGCTGGACTATCCCGAGCTGTACG
GCGGTTTCATCCATCCCTGGTCGAGTGGGCGCGATCTCTACTTCAACATCACGACCTGGAGCGACTACAACGTGTATCTC
ATGCACGCCGAACTGGCGGAGTGA

Upstream 100 bases:

>100_bases
TGGTGGGCTGCCTCCCCAGGCCGCGCCGGGAACTCGCGCATACCCGCCCACGGGCGCGGTAGGGTCGGGCGCTGGTCGGA
TTCGTGGCGCGAGGTGAGGG

Downstream 100 bases:

>100_bases
GTCCGGTCAGGAGAGCCGGACCTCGGCGATGGCGCGGCCGAAGAGTTTGCGGCCGCCGGAGGTGGCACCCAGCACCACGG
TGGCCGCGCGGCGGTCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MLMAVRMAAVIGAAGLLVAAQGAVGSAEPGGAVAVPGAGPCLTDPKPVHEDLIPETLEVPVPYPVVTVLPPEPPEPEPVR
TEMTLPSDPCVNPCPDLTDLPEPPPSLANRLGIPEILVNPKPFYFALPGPSPDPGEVPPPPEPVTPPTEAAPREAAPAAP
RVVQVREVAKQTGANSVNRTDKRWQVDGTDLGIMWESGPGEVAVAFGDTVGRGFHPPGGMGGDWRSNVLAFSTDRDLSDG
MTYDRMVTDSRCHAAEVLSSRKLDNVEITTIPTSGFALGDRQYLSYMSIRTWNSGPGTFYTNYGGIAYSDDRGQTWTKDP
HARWDNIFGLANFQVSAMVPHGDHVYMFGTPNTRLGAVGLARVPADQLLNKTAYQYWRDGQWTPVGGAASATPVVDAPAG
ELSVRFDASRGVWQMSYLDTARAAIVVREATTPQGAWSAPTPTVSVLDYPELYGGFIHPWSSGRDLYFNITTWSDYNVYL
MHAELAE

Sequences:

>Translated_487_residues
MLMAVRMAAVIGAAGLLVAAQGAVGSAEPGGAVAVPGAGPCLTDPKPVHEDLIPETLEVPVPYPVVTVLPPEPPEPEPVR
TEMTLPSDPCVNPCPDLTDLPEPPPSLANRLGIPEILVNPKPFYFALPGPSPDPGEVPPPPEPVTPPTEAAPREAAPAAP
RVVQVREVAKQTGANSVNRTDKRWQVDGTDLGIMWESGPGEVAVAFGDTVGRGFHPPGGMGGDWRSNVLAFSTDRDLSDG
MTYDRMVTDSRCHAAEVLSSRKLDNVEITTIPTSGFALGDRQYLSYMSIRTWNSGPGTFYTNYGGIAYSDDRGQTWTKDP
HARWDNIFGLANFQVSAMVPHGDHVYMFGTPNTRLGAVGLARVPADQLLNKTAYQYWRDGQWTPVGGAASATPVVDAPAG
ELSVRFDASRGVWQMSYLDTARAAIVVREATTPQGAWSAPTPTVSVLDYPELYGGFIHPWSSGRDLYFNITTWSDYNVYL
MHAELAE
>Mature_487_residues
MLMAVRMAAVIGAAGLLVAAQGAVGSAEPGGAVAVPGAGPCLTDPKPVHEDLIPETLEVPVPYPVVTVLPPEPPEPEPVR
TEMTLPSDPCVNPCPDLTDLPEPPPSLANRLGIPEILVNPKPFYFALPGPSPDPGEVPPPPEPVTPPTEAAPREAAPAAP
RVVQVREVAKQTGANSVNRTDKRWQVDGTDLGIMWESGPGEVAVAFGDTVGRGFHPPGGMGGDWRSNVLAFSTDRDLSDG
MTYDRMVTDSRCHAAEVLSSRKLDNVEITTIPTSGFALGDRQYLSYMSIRTWNSGPGTFYTNYGGIAYSDDRGQTWTKDP
HARWDNIFGLANFQVSAMVPHGDHVYMFGTPNTRLGAVGLARVPADQLLNKTAYQYWRDGQWTPVGGAASATPVVDAPAG
ELSVRFDASRGVWQMSYLDTARAAIVVREATTPQGAWSAPTPTVSVLDYPELYGGFIHPWSSGRDLYFNITTWSDYNVYL
MHAELAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52242; Mature: 52242

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMAVRMAAVIGAAGLLVAAQGAVGSAEPGGAVAVPGAGPCLTDPKPVHEDLIPETLEVP
CEEHHHHHHHHHHHCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCC
VPYPVVTVLPPEPPEPEPVRTEMTLPSDPCVNPCPDLTDLPEPPPSLANRLGIPEILVNP
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC
KPFYFALPGPSPDPGEVPPPPEPVTPPTEAAPREAAPAAPRVVQVREVAKQTGANSVNRT
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
DKRWQVDGTDLGIMWESGPGEVAVAFGDTVGRGFHPPGGMGGDWRSNVLAFSTDRDLSDG
CCEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
MTYDRMVTDSRCHAAEVLSSRKLDNVEITTIPTSGFALGDRQYLSYMSIRTWNSGPGTFY
CCCHHEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHEEEEEEEECCCCCEEE
TNYGGIAYSDDRGQTWTKDPHARWDNIFGLANFQVSAMVPHGDHVYMFGTPNTRLGAVGL
ECCCCEEEECCCCCCCCCCCCCCHHCEEEEECEEEEEECCCCCEEEEEECCCCCCCCEEE
ARVPADQLLNKTAYQYWRDGQWTPVGGAASATPVVDAPAGELSVRFDASRGVWQMSYLDT
ECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEHHHCC
ARAAIVVREATTPQGAWSAPTPTVSVLDYPELYGGFIHPWSSGRDLYFNITTWSDYNVYL
CEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHCCEECCCCCCCEEEEEEEEECCCEEEE
MHAELAE
EEEEECC
>Mature Secondary Structure
MLMAVRMAAVIGAAGLLVAAQGAVGSAEPGGAVAVPGAGPCLTDPKPVHEDLIPETLEVP
CEEHHHHHHHHHHHCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCC
VPYPVVTVLPPEPPEPEPVRTEMTLPSDPCVNPCPDLTDLPEPPPSLANRLGIPEILVNP
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECC
KPFYFALPGPSPDPGEVPPPPEPVTPPTEAAPREAAPAAPRVVQVREVAKQTGANSVNRT
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
DKRWQVDGTDLGIMWESGPGEVAVAFGDTVGRGFHPPGGMGGDWRSNVLAFSTDRDLSDG
CCEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
MTYDRMVTDSRCHAAEVLSSRKLDNVEITTIPTSGFALGDRQYLSYMSIRTWNSGPGTFY
CCCHHEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHEEEEEEEECCCCCEEE
TNYGGIAYSDDRGQTWTKDPHARWDNIFGLANFQVSAMVPHGDHVYMFGTPNTRLGAVGL
ECCCCEEEECCCCCCCCCCCCCCHHCEEEEECEEEEEECCCCCEEEEEECCCCCCCCEEE
ARVPADQLLNKTAYQYWRDGQWTPVGGAASATPVVDAPAGELSVRFDASRGVWQMSYLDT
ECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEEHHHCC
ARAAIVVREATTPQGAWSAPTPTVSVLDYPELYGGFIHPWSSGRDLYFNITTWSDYNVYL
CEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHCCEECCCCCCCEEEEEEEEECCCEEEE
MHAELAE
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA