| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54027257
Identifier: 54027257
GI number: 54027257
Start: 5584381
End: 5584833
Strand: Reverse
Name: 54027257
Synonym: nfa52830
Alternate gene names: NA
Gene position: 5584833-5584381 (Counterclockwise)
Preceding gene: 54027270
Following gene: 54027255
Centisome position: 92.75
GC content: 66.89
Gene sequence:
>453_bases TTGCCCAAGAATCTCGAAGCGACCGTCGACATCCTCGCCGCGCCCGAGCGCGTCTGGCAGATCGTCAGCGATCTGTCCCG GATGCCCGAGTTCAGCCCGATGACCCGCAAGATGATCCCGCTCGGCACGCCGAAGGCGGGGACCTGGACGGTCAACTGGA ACAAGGACGGCTGGAAGGTCTGGCCGACCAGTTCGCGGATCGTGCGGTTCGAGCCGGAACGCGAATTCGCCTTCCGGATG AACGAGAACGGCACCACCTGGAGTTTCACCCTCGAGCCCATCGCGAACGGCACCCGGCTCACCGAGCGCCGTGACGTCTC CGCGGGCGTGCGGTGGCCGGTGCGCAAGGTCATCGACACCGTGCTCGGTGGCGAGCCGGCCTTCGAGGAGAACCTGCTCG ACGGCATGAAGAAGACACTGGCCGCGATCAAGGCGGCCGCCGAGGCCGCCTGA
Upstream 100 bases:
>100_bases GTGACCGAATTGTCAGCGCGCCTCGCACATTAGGATGTGCGGCACGCGTCGTCCCCCGCGCTCGGCCACGGTGCCGGGAC GCTCGAACACGGAGGCAGAG
Downstream 100 bases:
>100_bases TCGGCGGTGTCCTACTTCAGCCTGGGCAGCGATACCACCTGGGCCGCGTAGGAGAGCCCGGCGCCGAAGGCGATCAACAG CGCCGTGTCGCCGGGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclase/Dehydrase; Activator Of; Polyketide Cylcase/Dehydrase
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPKNLEATVDILAAPERVWQIVSDLSRMPEFSPMTRKMIPLGTPKAGTWTVNWNKDGWKVWPTSSRIVRFEPEREFAFRM NENGTTWSFTLEPIANGTRLTERRDVSAGVRWPVRKVIDTVLGGEPAFEENLLDGMKKTLAAIKAAAEAA
Sequences:
>Translated_150_residues MPKNLEATVDILAAPERVWQIVSDLSRMPEFSPMTRKMIPLGTPKAGTWTVNWNKDGWKVWPTSSRIVRFEPEREFAFRM NENGTTWSFTLEPIANGTRLTERRDVSAGVRWPVRKVIDTVLGGEPAFEENLLDGMKKTLAAIKAAAEAA >Mature_149_residues PKNLEATVDILAAPERVWQIVSDLSRMPEFSPMTRKMIPLGTPKAGTWTVNWNKDGWKVWPTSSRIVRFEPEREFAFRMN ENGTTWSFTLEPIANGTRLTERRDVSAGVRWPVRKVIDTVLGGEPAFEENLLDGMKKTLAAIKAAAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16902; Mature: 16770
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNLEATVDILAAPERVWQIVSDLSRMPEFSPMTRKMIPLGTPKAGTWTVNWNKDGWKV CCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCEE WPTSSRIVRFEPEREFAFRMNENGTTWSFTLEPIANGTRLTERRDVSAGVRWPVRKVIDT ECCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH VLGGEPAFEENLLDGMKKTLAAIKAAAEAA HHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKNLEATVDILAAPERVWQIVSDLSRMPEFSPMTRKMIPLGTPKAGTWTVNWNKDGWKV CCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCEE WPTSSRIVRFEPEREFAFRMNENGTTWSFTLEPIANGTRLTERRDVSAGVRWPVRKVIDT ECCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH VLGGEPAFEENLLDGMKKTLAAIKAAAEAA HHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA