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The map label for this gene is 54027210

Identifier: 54027210

GI number: 54027210

Start: 5534379

End: 5535278

Strand: Reverse

Name: 54027210

Synonym: nfa52360

Alternate gene names: NA

Gene position: 5535278-5534379 (Counterclockwise)

Preceding gene: 54027211

Following gene: 54027209

Centisome position: 91.93

GC content: 69.89

Gene sequence:

>900_bases
ATGACCCGCGATTTCGTCGGCTACGGACCGCACCCGCCGCACCCGCACTGGCCCGGTGCCGCGCGGATCGCCGTCCAGTT
CGTGCTCAACTACGAGGAAGGCGCCGAGCGCAACGTCCTCGACGGCGACCCGCACTCGGAGACGTTCCTGACCGAGCTGA
CCCCCTGCGAACCCTTCCCGAACCGGCACATGAGCGTCGAATCGCTCTACGAGTACGGCTCGCGCGCGGGCTTGTGGCGG
GTCTTGCGGGTGTTCGAGCGGCGCGGGCTGCCGCTGACGATCTTCGCCGTCGCCCGCGCGATGCAACGCAATCCCGACGC
CGTGGCCGCCTGCGTCGAGCTCGGCCACGAGATCGCCTGCCACGGCCTGCGCTGGATCTCCTATCAACTCGTCGACCGGG
AGTCCGAACGCGCGGACATGGCCGAGGCGGTCGGCATCCTCACCGAACTCACCGGCGCGCCACCGCTGGGCTGGTACACC
GGCCGCGACTCACCTCACACCCGCGAACTGGTCGTCGAACACGGCGGCTTCGTCTACGACGCGGACTCCTACGCCGACGA
CCTGCCCTACTGGGTGCGCGTGCACGACCGCGACCACCTCGTCGTGCCGTACACCCTCGACACCAACGACATGCGCTTCG
CCTCCCCCGCCGGATTCCCCAGCGGCGACCAGTTCTTCACCCACCTCCGCGACGCCTTCGACGTCCTCTACCGGGAGGGC
GCACAGGGCGCGCCGAAAATGCTCTCCGTCGGACTGCACTGCCGGCTCGTCGGCCGCCCCGCCCGCACAGCCGCCCTCGA
GCGATTCCTCGACCACGTGCAATCCCACGACCGGGTGTGGATCACCCGCCGCATCGACATCGCCGAACACTGGCGGCGGG
TGCATCCGGCCCCGGGTTAG

Upstream 100 bases:

>100_bases
TCCCGACCGCCGCGGTCGCTGCCTCCGTCGAGGAGGTCCGGCTCGACATCTATCCCGACGGCGGCCTGGCCCGGGTCAGG
CTGTTCGGGGAGCTGGGCGG

Downstream 100 bases:

>100_bases
GCCTCAGCGCTCGCCCATTTCCGACAGCCGCGCCAGCCATCGCGGGTCCTGTTGGTCGGCTTCCATCTGCCGGCGCTCGG
CCCCCAGTGACGCCCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTRDFVGYGPHPPHPHWPGAARIAVQFVLNYEEGAERNVLDGDPHSETFLTELTPCEPFPNRHMSVESLYEYGSRAGLWR
VLRVFERRGLPLTIFAVARAMQRNPDAVAACVELGHEIACHGLRWISYQLVDRESERADMAEAVGILTELTGAPPLGWYT
GRDSPHTRELVVEHGGFVYDADSYADDLPYWVRVHDRDHLVVPYTLDTNDMRFASPAGFPSGDQFFTHLRDAFDVLYREG
AQGAPKMLSVGLHCRLVGRPARTAALERFLDHVQSHDRVWITRRIDIAEHWRRVHPAPG

Sequences:

>Translated_299_residues
MTRDFVGYGPHPPHPHWPGAARIAVQFVLNYEEGAERNVLDGDPHSETFLTELTPCEPFPNRHMSVESLYEYGSRAGLWR
VLRVFERRGLPLTIFAVARAMQRNPDAVAACVELGHEIACHGLRWISYQLVDRESERADMAEAVGILTELTGAPPLGWYT
GRDSPHTRELVVEHGGFVYDADSYADDLPYWVRVHDRDHLVVPYTLDTNDMRFASPAGFPSGDQFFTHLRDAFDVLYREG
AQGAPKMLSVGLHCRLVGRPARTAALERFLDHVQSHDRVWITRRIDIAEHWRRVHPAPG
>Mature_298_residues
TRDFVGYGPHPPHPHWPGAARIAVQFVLNYEEGAERNVLDGDPHSETFLTELTPCEPFPNRHMSVESLYEYGSRAGLWRV
LRVFERRGLPLTIFAVARAMQRNPDAVAACVELGHEIACHGLRWISYQLVDRESERADMAEAVGILTELTGAPPLGWYTG
RDSPHTRELVVEHGGFVYDADSYADDLPYWVRVHDRDHLVVPYTLDTNDMRFASPAGFPSGDQFFTHLRDAFDVLYREGA
QGAPKMLSVGLHCRLVGRPARTAALERFLDHVQSHDRVWITRRIDIAEHWRRVHPAPG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33939; Mature: 33807

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDFVGYGPHPPHPHWPGAARIAVQFVLNYEEGAERNVLDGDPHSETFLTELTPCEPFP
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
NRHMSVESLYEYGSRAGLWRVLRVFERRGLPLTIFAVARAMQRNPDAVAACVELGHEIAC
CCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHHHHHCHHHHH
HGLRWISYQLVDRESERADMAEAVGILTELTGAPPLGWYTGRDSPHTRELVVEHGGFVYD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEECCCEEEE
ADSYADDLPYWVRVHDRDHLVVPYTLDTNDMRFASPAGFPSGDQFFTHLRDAFDVLYREG
CCCCCCCCCEEEEEECCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCC
AQGAPKMLSVGLHCRLVGRPARTAALERFLDHVQSHDRVWITRRIDIAEHWRRVHPAPG
CCCCHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCC
>Mature Secondary Structure 
TRDFVGYGPHPPHPHWPGAARIAVQFVLNYEEGAERNVLDGDPHSETFLTELTPCEPFP
CCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
NRHMSVESLYEYGSRAGLWRVLRVFERRGLPLTIFAVARAMQRNPDAVAACVELGHEIAC
CCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHHHHHCHHHHH
HGLRWISYQLVDRESERADMAEAVGILTELTGAPPLGWYTGRDSPHTRELVVEHGGFVYD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEECCCEEEE
ADSYADDLPYWVRVHDRDHLVVPYTLDTNDMRFASPAGFPSGDQFFTHLRDAFDVLYREG
CCCCCCCCCEEEEEECCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCC
AQGAPKMLSVGLHCRLVGRPARTAALERFLDHVQSHDRVWITRRIDIAEHWRRVHPAPG
CCCCHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA