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The map label for this gene is ccdA [H]

Identifier: 54027131

GI number: 54027131

Start: 5457826

End: 5458656

Strand: Reverse

Name: ccdA [H]

Synonym: nfa51570

Alternate gene names: 54027131

Gene position: 5458656-5457826 (Counterclockwise)

Preceding gene: 54027132

Following gene: 54027130

Centisome position: 90.66

GC content: 73.04

Gene sequence:

>831_bases
GTGACCGTGCTCGCCGGGGTGGGGGAATCGTTCCAGCAGACCGCGGCCACCGGCCCGGTGCTGCTCGCGCTCGGCGCCTG
CGTGCTGGCGGGGCTGGTGTCCTTCGCCTCGCCGTGCGTGGTGCCGCTCGTGCCGGGCTACCTGTCCTATCTGGCCGGAC
TGGTCGGCGCGGAGGCGCCGCCCGCCACCCCGGCGGAGGCGGCCGAGGGACGGGTCGCCACCGTCACCACCGCCGACCGC
GCGGCGAAATTGCGTGTCGCCGGTGCGGCCGGACTCTTCGTCGCCGGGTTCACCGTGGTCTTCGTGCTCGCCACCGCGAC
GGTGTTCGGACTCATCCAGACCCTCAACGTCAATCGCGACCTGCTGCAACGGGTCGGCGGTGTGGTGACGATCGTGATGG
GCCTGGCGTTCCTCGGCCTGATCCCGGCATTGCAGCGCGACACCCGGATGGCGCCACGCAGGCTCACCGGCATCGTGGGC
GCGCCGCTGCTCGGCGGCGTGTTCGCCCTGGGCTGGACGCCGTGCCTCGGCCCGACGCTGTCGGGGGTGATGGCGGTGGC
CGCGGGCACCGAGGGCACCACCGCGGTTCGCGGCGTCGCCCTGATCGTGGCCTACTGCCTCGGTCTCGGGCTGCCGTTCA
TCGTCCTGGCCTTCGGCTCGGCGGGCGCGCTGCGCGGCGTCGGGTGGTTGCGCCGCAACTCGCGCACCATCCAGATCATC
GGCGGCCTGCTGCTCGTCGCGGTCGGGATCGCGCTGGTCACCGGAGCCTGGGACCAGTTCGTCGGCTGGGTGCGCGACGC
GTTCGTCTCCGAGGTGACCCTGCCGATATGA

Upstream 100 bases:

>100_bases
TGCTCGATCGCGAACACCGGGTCGCCGCGGTGTTCCTGCGCACCCTGCTCGCCGAGGACCTGCAACCGGTCGTGCAGCGC
ATCGCCGAGGAGGGCAGGCA

Downstream 100 bases:

>100_bases
CCGTGACCGAACAGCCCGCCGCCGACCCCGCCCCCCGGACCCCGCCCCGCCAGTCGCTCCCCGGGCGCGCCTGGGCGCTG
GTGCGCAACACCTGGCGCGG

Product: putative cytochrome c biogenesis membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTVLAGVGESFQQTAATGPVLLALGACVLAGLVSFASPCVVPLVPGYLSYLAGLVGAEAPPATPAEAAEGRVATVTTADR
AAKLRVAGAAGLFVAGFTVVFVLATATVFGLIQTLNVNRDLLQRVGGVVTIVMGLAFLGLIPALQRDTRMAPRRLTGIVG
APLLGGVFALGWTPCLGPTLSGVMAVAAGTEGTTAVRGVALIVAYCLGLGLPFIVLAFGSAGALRGVGWLRRNSRTIQII
GGLLLVAVGIALVTGAWDQFVGWVRDAFVSEVTLPI

Sequences:

>Translated_276_residues
MTVLAGVGESFQQTAATGPVLLALGACVLAGLVSFASPCVVPLVPGYLSYLAGLVGAEAPPATPAEAAEGRVATVTTADR
AAKLRVAGAAGLFVAGFTVVFVLATATVFGLIQTLNVNRDLLQRVGGVVTIVMGLAFLGLIPALQRDTRMAPRRLTGIVG
APLLGGVFALGWTPCLGPTLSGVMAVAAGTEGTTAVRGVALIVAYCLGLGLPFIVLAFGSAGALRGVGWLRRNSRTIQII
GGLLLVAVGIALVTGAWDQFVGWVRDAFVSEVTLPI
>Mature_275_residues
TVLAGVGESFQQTAATGPVLLALGACVLAGLVSFASPCVVPLVPGYLSYLAGLVGAEAPPATPAEAAEGRVATVTTADRA
AKLRVAGAAGLFVAGFTVVFVLATATVFGLIQTLNVNRDLLQRVGGVVTIVMGLAFLGLIPALQRDTRMAPRRLTGIVGA
PLLGGVFALGWTPCLGPTLSGVMAVAAGTEGTTAVRGVALIVAYCLGLGLPFIVLAFGSAGALRGVGWLRRNSRTIQIIG
GLLLVAVGIALVTGAWDQFVGWVRDAFVSEVTLPI

Specific function: Required for cytochrome c synthesis and stage V of sporulation. Might transfer reducing equivalents across the cytoplasmic membrane, promoting efficient disulfide bond isomerization of proteins localized on the outer surface of the membrane or in the spor

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 27875; Mature: 27744

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLAGVGESFQQTAATGPVLLALGACVLAGLVSFASPCVVPLVPGYLSYLAGLVGAEAP
CCEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PATPAEAAEGRVATVTTADRAAKLRVAGAAGLFVAGFTVVFVLATATVFGLIQTLNVNRD
CCCCCHHHCCCEEEEEEHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLQRVGGVVTIVMGLAFLGLIPALQRDTRMAPRRLTGIVGAPLLGGVFALGWTPCLGPTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH
SGVMAVAAGTEGTTAVRGVALIVAYCLGLGLPFIVLAFGSAGALRGVGWLRRNSRTIQII
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
GGLLLVAVGIALVTGAWDQFVGWVRDAFVSEVTLPI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVLAGVGESFQQTAATGPVLLALGACVLAGLVSFASPCVVPLVPGYLSYLAGLVGAEAP
CEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
PATPAEAAEGRVATVTTADRAAKLRVAGAAGLFVAGFTVVFVLATATVFGLIQTLNVNRD
CCCCCHHHCCCEEEEEEHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LLQRVGGVVTIVMGLAFLGLIPALQRDTRMAPRRLTGIVGAPLLGGVFALGWTPCLGPTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH
SGVMAVAAGTEGTTAVRGVALIVAYCLGLGLPFIVLAFGSAGALRGVGWLRRNSRTIQII
HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
GGLLLVAVGIALVTGAWDQFVGWVRDAFVSEVTLPI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]