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The map label for this gene is 54027123

Identifier: 54027123

GI number: 54027123

Start: 5451984

End: 5452553

Strand: Reverse

Name: 54027123

Synonym: nfa51490

Alternate gene names: NA

Gene position: 5452553-5451984 (Counterclockwise)

Preceding gene: 54027124

Following gene: 54027122

Centisome position: 90.56

GC content: 74.39

Gene sequence:

>570_bases
ATGTTCGAACGATTCACTCGCTCGGCCCGGACGGCCGTCGTCGTCGCCCAGGAGGAGGCCAGGGAACTGCGTTCCCCGCG
CATCGAGGTGGAGCACCTGCTGCTCGGCCTGCTCGACCAGGGCGAGCCCGGGCTGCGCGAGCTACTCGCCGAGGCCGGGC
TCACCCGCGACGGCGTGCGGCGCACCCTCGCCGCCGACGCGGCCGGCGACCCGCTCGGCCCCGAGGACGCCGCGGCGCTG
CGCTCGATCGGCATCGACCTCGACGCGGTACGCGAGACGCTGGCCGCGGAGTTCGGCGAGGACGCTCTCGACCGCGCGGC
CCCCGAGCCGCAGCGCCGCCGCTGGACCGGCGGGCACATTCCCTTCACCAAGGAGGCGAAGAAGGTGCTCGAACTGGCGT
TGCGGGAGGCCCTGGCGCGCAAGGACCGTGGCATCGAATCCGGCCACGTCCTGCTCGGCATCCTGCGCGCGCCCAACGCC
ACCACGGAGCGGTTGTTCGGCGGTGCGGCCCGCGTCGAGTCGTTGCGTCCCCGCGTGCACGAGCTGCTGGACCGGCAGCG
CGCGGCGTGA

Upstream 100 bases:

>100_bases
ACGCCCGCGATCAGGGCTGGTCCTGGCAGGCCATCGCCGACGCGCTCGAGGTCAGCAAGCAGGCGGTCCACCAGAAATAC
AACCGGAAAGGCACCCGCTG

Downstream 100 bases:

>100_bases
GCGACGCGTTTCGCCGCCGCCCCGCACGCTGCGGTGCCGCTTAGCATGGGCGCATGCAGCTTGTGATTCGGTTGGTCATC
AACGCGGTCGCCCTGTGGCT

Product: putative Clp protease subunit

Products: NA

Alternate protein names: Clp Domain-Containing Protein; Clp Protease Subunit; ATP-Dependent Clp Protease; Clp N Terminal Domain-Containing Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MFERFTRSARTAVVVAQEEARELRSPRIEVEHLLLGLLDQGEPGLRELLAEAGLTRDGVRRTLAADAAGDPLGPEDAAAL
RSIGIDLDAVRETLAAEFGEDALDRAAPEPQRRRWTGGHIPFTKEAKKVLELALREALARKDRGIESGHVLLGILRAPNA
TTERLFGGAARVESLRPRVHELLDRQRAA

Sequences:

>Translated_189_residues
MFERFTRSARTAVVVAQEEARELRSPRIEVEHLLLGLLDQGEPGLRELLAEAGLTRDGVRRTLAADAAGDPLGPEDAAAL
RSIGIDLDAVRETLAAEFGEDALDRAAPEPQRRRWTGGHIPFTKEAKKVLELALREALARKDRGIESGHVLLGILRAPNA
TTERLFGGAARVESLRPRVHELLDRQRAA
>Mature_189_residues
MFERFTRSARTAVVVAQEEARELRSPRIEVEHLLLGLLDQGEPGLRELLAEAGLTRDGVRRTLAADAAGDPLGPEDAAAL
RSIGIDLDAVRETLAAEFGEDALDRAAPEPQRRRWTGGHIPFTKEAKKVLELALREALARKDRGIESGHVLLGILRAPNA
TTERLFGGAARVESLRPRVHELLDRQRAA

Specific function: Unknown

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20717; Mature: 20717

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERFTRSARTAVVVAQEEARELRSPRIEVEHLLLGLLDQGEPGLRELLAEAGLTRDGVR
CCHHHHHHHHHEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
RTLAADAAGDPLGPEDAAALRSIGIDLDAVRETLAAEFGEDALDRAAPEPQRRRWTGGHI
HHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHCCCCCCC
PFTKEAKKVLELALREALARKDRGIESGHVLLGILRAPNATTERLFGGAARVESLRPRVH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ELLDRQRAA
HHHHHHCCC
>Mature Secondary Structure
MFERFTRSARTAVVVAQEEARELRSPRIEVEHLLLGLLDQGEPGLRELLAEAGLTRDGVR
CCHHHHHHHHHEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
RTLAADAAGDPLGPEDAAALRSIGIDLDAVRETLAAEFGEDALDRAAPEPQRRRWTGGHI
HHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCCHHHHCCCCCCC
PFTKEAKKVLELALREALARKDRGIESGHVLLGILRAPNATTERLFGGAARVESLRPRVH
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ELLDRQRAA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA