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The map label for this gene is 54027122

Identifier: 54027122

GI number: 54027122

Start: 5451538

End: 5451930

Strand: Reverse

Name: 54027122

Synonym: nfa51480

Alternate gene names: NA

Gene position: 5451930-5451538 (Counterclockwise)

Preceding gene: 54027123

Following gene: 54027119

Centisome position: 90.55

GC content: 65.14

Gene sequence:

>393_bases
ATGCAGCTTGTGATTCGGTTGGTCATCAACGCGGTCGCCCTGTGGCTGGCCGCCGCCTGGGTGAGCGGGATCGAGATCCT
CAGCCCCGCCGAGGACGGCACCGGCGCCAGGATCGTCGTCGTGCTGGTGATCGCCGCGGTGTTCACCCTCGTCAACGCGT
TGGTGAAACCGGTGGTGAAACTGCTGTCGCTGCCGCTGATCCTGCTCACCCTCGGCCTGTTCCTGCTGGTGATCAACGCC
CTGATGCTGTGGCTCACCGCGAAACTGACCGAGCTGGCCGACACCAACGGCTACGGGCTCGAGGTCAACGGCTTCTGGGC
GGCGGTGTTCGGCGGCATCATCGTCTCGATCGTGAACTGGGTACTGGGCGCCCTGGTGCCCGACAACGACTGA

Upstream 100 bases:

>100_bases
TGCGTCCCCGCGTGCACGAGCTGCTGGACCGGCAGCGCGCGGCGTGAGCGACGCGTTTCGCCGCCGCCCCGCACGCTGCG
GTGCCGCTTAGCATGGGCGC

Downstream 100 bases:

>100_bases
GCCGTACCCGAGTCAGCCCAGCGCGAGCGCGAGCGCGCCGAGCACCGACCAGGCCAGCAGGGCGAGACCGGAATCACGGA
GCGCCGGAATGAGTTCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQLVIRLVINAVALWLAAAWVSGIEILSPAEDGTGARIVVVLVIAAVFTLVNALVKPVVKLLSLPLILLTLGLFLLVINA
LMLWLTAKLTELADTNGYGLEVNGFWAAVFGGIIVSIVNWVLGALVPDND

Sequences:

>Translated_130_residues
MQLVIRLVINAVALWLAAAWVSGIEILSPAEDGTGARIVVVLVIAAVFTLVNALVKPVVKLLSLPLILLTLGLFLLVINA
LMLWLTAKLTELADTNGYGLEVNGFWAAVFGGIIVSIVNWVLGALVPDND
>Mature_130_residues
MQLVIRLVINAVALWLAAAWVSGIEILSPAEDGTGARIVVVLVIAAVFTLVNALVKPVVKLLSLPLILLTLGLFLLVINA
LMLWLTAKLTELADTNGYGLEVNGFWAAVFGGIIVSIVNWVLGALVPDND

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007165 [H]

Pfam domain/function: PF04020 DUF360 [H]

EC number: NA

Molecular weight: Translated: 13785; Mature: 13785

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVIRLVINAVALWLAAAWVSGIEILSPAEDGTGARIVVVLVIAAVFTLVNALVKPVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLSLPLILLTLGLFLLVINALMLWLTAKLTELADTNGYGLEVNGFWAAVFGGIIVSIVNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
VLGALVPDND
HHHHHCCCCC
>Mature Secondary Structure
MQLVIRLVINAVALWLAAAWVSGIEILSPAEDGTGARIVVVLVIAAVFTLVNALVKPVVK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLSLPLILLTLGLFLLVINALMLWLTAKLTELADTNGYGLEVNGFWAAVFGGIIVSIVNW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH
VLGALVPDND
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8550407; 12000953 [H]