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The map label for this gene is 54027100

Identifier: 54027100

GI number: 54027100

Start: 5426824

End: 5427327

Strand: Reverse

Name: 54027100

Synonym: nfa51260

Alternate gene names: NA

Gene position: 5427327-5426824 (Counterclockwise)

Preceding gene: 54027105

Following gene: 54027096

Centisome position: 90.14

GC content: 68.45

Gene sequence:

>504_bases
ATGTCCCGAAAATTCCGCTTCACCGTGCCGTACAGCGTTCCGGTCGAAGATCTGCACCGGGCACTCACCAGCGACGACGC
CTGGCAGGCGCGTTTCGCCGAGGCGTCCACCGCGACGCTGGACATCTCCCATCCCGGCGGGCCGGGTACCGCCCGCATCC
ACATGACCGAACGAGCCCGCCGGGACAAGATCCCCGCCCTGGTGAGCAAGGTCCTCTCCGGCGAGCTCGTGTTCGACCGC
ACCGACGACTGGCGCCCGCTCACCGGCGGCGCCGCCGAGGGCGATTTCCGGGTCACCACCAGCGGCATCACCGCCACCAT
GGCGGGCACCCAGCGGTTGCGCGGTACCGCGCAGGGCAGTGAGATCGAGGTCGACGGGTCGCTCGAGGTCAAGGTCCCCC
TGGTCGGACGCGCCATCGAACCGCTGGCCGAACAGCTGCTGCACCGTGTGCTCGGCAGCGAACGCAAGTTCTTCGAACAG
TGGTGTGCCCAGACCAGATCCTGA

Upstream 100 bases:

>100_bases
CGCCGATCCTGGCCCGCCGCAGCCGGGTCGCCCGCATTTCGGACTGGCTGGTTTCCGACACGGCCACAGGCTACCGAGGG
GCTCGGCTACGGTGGCGGCC

Downstream 100 bases:

>100_bases
CCCGGCGGCGTCAGCCCGCGACGTTCGGATCGAACTCCCGCCGCTCCACCAGCACCAGCCAGTTGCCGGAGTTGTCGCGG
ATGATCGCCTCGGTGCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSRKFRFTVPYSVPVEDLHRALTSDDAWQARFAEASTATLDISHPGGPGTARIHMTERARRDKIPALVSKVLSGELVFDR
TDDWRPLTGGAAEGDFRVTTSGITATMAGTQRLRGTAQGSEIEVDGSLEVKVPLVGRAIEPLAEQLLHRVLGSERKFFEQ
WCAQTRS

Sequences:

>Translated_167_residues
MSRKFRFTVPYSVPVEDLHRALTSDDAWQARFAEASTATLDISHPGGPGTARIHMTERARRDKIPALVSKVLSGELVFDR
TDDWRPLTGGAAEGDFRVTTSGITATMAGTQRLRGTAQGSEIEVDGSLEVKVPLVGRAIEPLAEQLLHRVLGSERKFFEQ
WCAQTRS
>Mature_166_residues
SRKFRFTVPYSVPVEDLHRALTSDDAWQARFAEASTATLDISHPGGPGTARIHMTERARRDKIPALVSKVLSGELVFDRT
DDWRPLTGGAAEGDFRVTTSGITATMAGTQRLRGTAQGSEIEVDGSLEVKVPLVGRAIEPLAEQLLHRVLGSERKFFEQW
CAQTRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019639 [H]

Pfam domain/function: PF10698 DUF2505 [H]

EC number: NA

Molecular weight: Translated: 18379; Mature: 18248

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKFRFTVPYSVPVEDLHRALTSDDAWQARFAEASTATLDISHPGGPGTARIHMTERAR
CCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEHHHHH
RDKIPALVSKVLSGELVFDRTDDWRPLTGGAAEGDFRVTTSGITATMAGTQRLRGTAQGS
HCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEHHHHHHHCCCCCCC
EIEVDGSLEVKVPLVGRAIEPLAEQLLHRVLGSERKFFEQWCAQTRS
EEEECCCEEEEECHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRKFRFTVPYSVPVEDLHRALTSDDAWQARFAEASTATLDISHPGGPGTARIHMTERAR
CCCEEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEHHHHH
RDKIPALVSKVLSGELVFDRTDDWRPLTGGAAEGDFRVTTSGITATMAGTQRLRGTAQGS
HCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEECCEEEEHHHHHHHCCCCCCC
EIEVDGSLEVKVPLVGRAIEPLAEQLLHRVLGSERKFFEQWCAQTRS
EEEECCCEEEEECHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]