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The map label for this gene is 54027010

Identifier: 54027010

GI number: 54027010

Start: 5290509

End: 5291138

Strand: Reverse

Name: 54027010

Synonym: nfa50360

Alternate gene names: NA

Gene position: 5291138-5290509 (Counterclockwise)

Preceding gene: 54027017

Following gene: 54027008

Centisome position: 87.87

GC content: 72.54

Gene sequence:

>630_bases
GTGTGGGAGAGGGGTGTGCGCGTGGTCGGCACCGAGGCGTCCGAAGGCACCCGCCGCGAGCAGTTGAAAGCCGAGCGGCG
GCGCAGGCTGCTCGAGGCCGGCGCCCGCCTCATCGCCGACCGCGGCTTCCTCGGCGTCCGGCTCGACGACCTCGGCGCGG
CCGTCGGCATCAGCGGCCCCGCGGTCTACCGGCACTTCCCCAGCAAGGAAGCGCTGCTGGTGGAACTCCTGGTCGGCGTC
AGTGAACGCCTCCTCGACGGCGGCCGGGCCGTGCTCGCCGACCACGACGGCGGAGACCCGCGATCGGTCATCGCCGGACT
CGTCGACTTCCACCTCGACTTCGCCCTCGGCGAGCCCGAACTCATCCGCATCCAGGACCGCGACCTGGACCAGATGCCCG
ACGACGCCCGCCGCCGCGTCCGCCGCACCCAGCGGCAATACGTCGAACTGTGGGTGGACGCGCTACAGCGGGTCCACCCG
CAGCTGTCCGAAGGCGAAGCCCGCGTACGGGCCCACGCGGTGTTCGGACTGATGAACTCGACCCCGCACAGCGCGACGGC
CTCCGACGCGGAGCGCGTCCGACCGGCCCTACGCGAAATGGCGTTGGCGGCGCTGGTGGGGGTGAGCTGA

Upstream 100 bases:

>100_bases
TGGAGGTGGAGCGGCCGATCCGGCCGATCCAGTTAGTCGCCGATAACTGAGATTCAGGTTAATCTTGATTAACTGAGTTG
TCCAGGCCCGGGTCAGGGGC

Downstream 100 bases:

>100_bases
CCCTCCTGCTCCGAAATTGGAACAGCCGCCGTCAAAGGGGGTCGACCTCCGCGCGGGAGGGCGATGGCAGCGCCTTCACG
ACCGCGGAAAGCGGCGCCCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; Regulatory Protein; LOW QUALITY PROTEIN TetR-Family Transcriptional Regulator; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MWERGVRVVGTEASEGTRREQLKAERRRRLLEAGARLIADRGFLGVRLDDLGAAVGISGPAVYRHFPSKEALLVELLVGV
SERLLDGGRAVLADHDGGDPRSVIAGLVDFHLDFALGEPELIRIQDRDLDQMPDDARRRVRRTQRQYVELWVDALQRVHP
QLSEGEARVRAHAVFGLMNSTPHSATASDAERVRPALREMALAALVGVS

Sequences:

>Translated_209_residues
MWERGVRVVGTEASEGTRREQLKAERRRRLLEAGARLIADRGFLGVRLDDLGAAVGISGPAVYRHFPSKEALLVELLVGV
SERLLDGGRAVLADHDGGDPRSVIAGLVDFHLDFALGEPELIRIQDRDLDQMPDDARRRVRRTQRQYVELWVDALQRVHP
QLSEGEARVRAHAVFGLMNSTPHSATASDAERVRPALREMALAALVGVS
>Mature_209_residues
MWERGVRVVGTEASEGTRREQLKAERRRRLLEAGARLIADRGFLGVRLDDLGAAVGISGPAVYRHFPSKEALLVELLVGV
SERLLDGGRAVLADHDGGDPRSVIAGLVDFHLDFALGEPELIRIQDRDLDQMPDDARRRVRRTQRQYVELWVDALQRVHP
QLSEGEARVRAHAVFGLMNSTPHSATASDAERVRPALREMALAALVGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23109; Mature: 23109

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWERGVRVVGTEASEGTRREQLKAERRRRLLEAGARLIADRGFLGVRLDDLGAAVGISGP
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCHHHCCCCC
AVYRHFPSKEALLVELLVGVSERLLDGGRAVLADHDGGDPRSVIAGLVDFHLDFALGEPE
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
LIRIQDRDLDQMPDDARRRVRRTQRQYVELWVDALQRVHPQLSEGEARVRAHAVFGLMNS
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
TPHSATASDAERVRPALREMALAALVGVS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWERGVRVVGTEASEGTRREQLKAERRRRLLEAGARLIADRGFLGVRLDDLGAAVGISGP
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCHHHCCCCC
AVYRHFPSKEALLVELLVGVSERLLDGGRAVLADHDGGDPRSVIAGLVDFHLDFALGEPE
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
LIRIQDRDLDQMPDDARRRVRRTQRQYVELWVDALQRVHPQLSEGEARVRAHAVFGLMNS
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
TPHSATASDAERVRPALREMALAALVGVS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA