| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is mprB [H]
Identifier: 54026937
GI number: 54026937
Start: 5178975
End: 5180441
Strand: Reverse
Name: mprB [H]
Synonym: nfa49630
Alternate gene names: 54026937
Gene position: 5180441-5178975 (Counterclockwise)
Preceding gene: 54026938
Following gene: 54026936
Centisome position: 86.04
GC content: 71.57
Gene sequence:
>1467_bases ATGGCACGAAGCGCGCCCCGGCGGCCCGCCGTCGCCCCGGTCGGCCGGCCGGTCGAACCGCCGCCGATGCGTCCGCCGAT GCCCCTGACCAGTTCGGTGTCGCTGCGCTGGCGGGTCACCCTGCTGGCCGCCTCGGTGGTGGCGATCGCGGTGGCGGTCA CCTCGATCGCCGCCTACGCGATGGTGGCCAGGGCGCTCTACGCCGATGTCGACGAGCAGCTGCGCGCCCGCGCCGCCACC ATGATCGACAACAATTTCGACAGCCTGGGTTTCCAATCGATCATCCTGGCCGGGCTGTACTCCAACGATGTCGGCGTGGC GCTGATCTTCGCCGACCACAAGTCCTACATGCCCCCGCAGCAGACCATTCCGCCGGTGGGCGAGCAGGAACTCGGGGTCG CCGACGGCCAGCTCGCCTCCTCGCTGCGCACGGTGAGCAGCCAGCGGGTGCTGGCCGTGCACACCAACTCCGGCGCCACG CTGGTCATCTCGCAGCGGCTCGAACCGACCAGGGAGGTGCTCGACCGGCTGGCCTGGCTGCTGTTCGTGGTGGGCGGCTG CGGCGTGGTCCTCGCGGCCGCGGCGGGCACCGCGGTGGGCCGCACCGGCCTGCGTCCGATCGCCCGGCTCACCGCCGCCA CCGAACGCATCGCGCGCACCGACGACCTCACCCCGATCCCGGTGACCGGCGACGACGAATTGGCGCGGTTGACCGAGAGT TTCAACACCATGCTGCGGGCGCTCGCCGAATCCCGCGACCGCCAGCGCAGGCTCGTCGCCGACGCGGGACACGAACTGCG CACCCCGCTGACCTCGTTGCGCACCAACATGGAACTGCTCATCGCCTCCAGCCGCCCCGGCGCGCCGCAACTGCCCGAGC AGGACATGGCCGAACTGCGCGCGGACGTGGTCGCCCAGATCGAGGAACTGTCCACCCTGGTCGGAGACCTGGTCGACCTG GCGCGCGAGGACGCGCCGGAGACGGTCTACGACCGGGTCGACCTCGGTGAGGTGGCCGAACGCGCGCTGGAGCGCGCCCG GCGCCGCCGCGCCGATGTGGAATTCGTGGCGGAACTGCGGCCCTGGTTCGTCTACGGCCACGACGCCGCGCTCGAACGCG CGATCCTCAACGTGCTCGACAACGCCGCGAAGTGGAGCCCGGCGGGGGAGCAGGTCGGGGTGCGCATGCGCGAGACCGGC CGCGGGCTGCTCGAGCTCACCGTGGACGACGCCGGTCCCGGTATCCCGCCCGAGGAGCGCGAGCTGGTGTTCGAGCGCTT CTACCGCACCACCGCCTCCCGGTCGATGCCGGGATCGGGCCTCGGCCTGGCGATCGTCAAGCAGGTGGTGACCAAACACG GCGGCACCATCACCATCGACACCTCCGACCGCGGCGGCGCCTGCATTCGTATCGTGTTACCCGGTGAGACGGGTGCCCCC GGTCCTGGCCTGGACCAGCGGGAATGA
Upstream 100 bases:
>100_bases TACCTGCGACGCAAGACCGAGGCCGAGGGCGAGCCGCGGCTGATCCACACCGTGCGCGGCGTCGGGTACGTGCTGCGCGA GACCCCGCCGTAGGCGCGCG
Downstream 100 bases:
>100_bases CGGCCGGGATTGACTTGTGATCCGCCGGGCACTCACCTCTCGGAAAACTGAAAGCACGGTCTCAGTCCGCTCTAAGCCGA CCCGGCCAGGCTCGACGGTG
Product: putative two-component system sensor kinase
Products: NA
Alternate protein names: Mycobacterial persistence regulator B [H]
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MARSAPRRPAVAPVGRPVEPPPMRPPMPLTSSVSLRWRVTLLAASVVAIAVAVTSIAAYAMVARALYADVDEQLRARAAT MIDNNFDSLGFQSIILAGLYSNDVGVALIFADHKSYMPPQQTIPPVGEQELGVADGQLASSLRTVSSQRVLAVHTNSGAT LVISQRLEPTREVLDRLAWLLFVVGGCGVVLAAAAGTAVGRTGLRPIARLTAATERIARTDDLTPIPVTGDDELARLTES FNTMLRALAESRDRQRRLVADAGHELRTPLTSLRTNMELLIASSRPGAPQLPEQDMAELRADVVAQIEELSTLVGDLVDL AREDAPETVYDRVDLGEVAERALERARRRRADVEFVAELRPWFVYGHDAALERAILNVLDNAAKWSPAGEQVGVRMRETG RGLLELTVDDAGPGIPPEERELVFERFYRTTASRSMPGSGLGLAIVKQVVTKHGGTITIDTSDRGGACIRIVLPGETGAP GPGLDQRE
Sequences:
>Translated_488_residues MARSAPRRPAVAPVGRPVEPPPMRPPMPLTSSVSLRWRVTLLAASVVAIAVAVTSIAAYAMVARALYADVDEQLRARAAT MIDNNFDSLGFQSIILAGLYSNDVGVALIFADHKSYMPPQQTIPPVGEQELGVADGQLASSLRTVSSQRVLAVHTNSGAT LVISQRLEPTREVLDRLAWLLFVVGGCGVVLAAAAGTAVGRTGLRPIARLTAATERIARTDDLTPIPVTGDDELARLTES FNTMLRALAESRDRQRRLVADAGHELRTPLTSLRTNMELLIASSRPGAPQLPEQDMAELRADVVAQIEELSTLVGDLVDL AREDAPETVYDRVDLGEVAERALERARRRRADVEFVAELRPWFVYGHDAALERAILNVLDNAAKWSPAGEQVGVRMRETG RGLLELTVDDAGPGIPPEERELVFERFYRTTASRSMPGSGLGLAIVKQVVTKHGGTITIDTSDRGGACIRIVLPGETGAP GPGLDQRE >Mature_487_residues ARSAPRRPAVAPVGRPVEPPPMRPPMPLTSSVSLRWRVTLLAASVVAIAVAVTSIAAYAMVARALYADVDEQLRARAATM IDNNFDSLGFQSIILAGLYSNDVGVALIFADHKSYMPPQQTIPPVGEQELGVADGQLASSLRTVSSQRVLAVHTNSGATL VISQRLEPTREVLDRLAWLLFVVGGCGVVLAAAAGTAVGRTGLRPIARLTAATERIARTDDLTPIPVTGDDELARLTESF NTMLRALAESRDRQRRLVADAGHELRTPLTSLRTNMELLIASSRPGAPQLPEQDMAELRADVVAQIEELSTLVGDLVDLA REDAPETVYDRVDLGEVAERALERARRRRADVEFVAELRPWFVYGHDAALERAILNVLDNAAKWSPAGEQVGVRMRETGR GLLELTVDDAGPGIPPEERELVFERFYRTTASRSMPGSGLGLAIVKQVVTKHGGTITIDTSDRGGACIRIVLPGETGAPG PGLDQRE
Specific function: Member of the two-component regulatory system mprB/mprA which contributes to maintaining a balance among several systems involved in stress resistance and is required for establishment and maintenance of persistent infection in the host. In response to en
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=326, Percent_Identity=29.7546012269939, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1788393, Length=281, Percent_Identity=32.7402135231317, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790346, Length=278, Percent_Identity=32.0143884892086, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789808, Length=305, Percent_Identity=31.1475409836066, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI1788279, Length=302, Percent_Identity=28.476821192053, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=33.0677290836653, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=32.7510917030568, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790861, Length=295, Percent_Identity=29.8305084745763, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789403, Length=466, Percent_Identity=25.7510729613734, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1787894, Length=297, Percent_Identity=28.2828282828283, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1787374, Length=307, Percent_Identity=27.0358306188925, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1790551, Length=266, Percent_Identity=28.1954887218045, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=26.530612244898, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI87082128, Length=332, Percent_Identity=24.3975903614458, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788713, Length=239, Percent_Identity=23.0125523012552, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788549, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=26.457399103139, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=26.9911504424779, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=340, Percent_Identity=25.5882352941176, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1790300, Length=234, Percent_Identity=28.6324786324786, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52538; Mature: 52406
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSAPRRPAVAPVGRPVEPPPMRPPMPLTSSVSLRWRVTLLAASVVAIAVAVTSIAAYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH MVARALYADVDEQLRARAATMIDNNFDSLGFQSIILAGLYSNDVGVALIFADHKSYMPPQ HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC QTIPPVGEQELGVADGQLASSLRTVSSQRVLAVHTNSGATLVISQRLEPTREVLDRLAWL CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHH LFVVGGCGVVLAAAAGTAVGRTGLRPIARLTAATERIARTDDLTPIPVTGDDELARLTES HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH FNTMLRALAESRDRQRRLVADAGHELRTPLTSLRTNMELLIASSRPGAPQLPEQDMAELR HHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH ADVVAQIEELSTLVGDLVDLAREDAPETVYDRVDLGEVAERALERARRRRADVEFVAELR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCC PWFVYGHDAALERAILNVLDNAAKWSPAGEQVGVRMRETGRGLLELTVDDAGPGIPPEER CEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCEEEEEECCCCCCCCCHHH ELVFERFYRTTASRSMPGSGLGLAIVKQVVTKHGGTITIDTSDRGGACIRIVLPGETGAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCC GPGLDQRE CCCCCCCC >Mature Secondary Structure ARSAPRRPAVAPVGRPVEPPPMRPPMPLTSSVSLRWRVTLLAASVVAIAVAVTSIAAYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH MVARALYADVDEQLRARAATMIDNNFDSLGFQSIILAGLYSNDVGVALIFADHKSYMPPQ HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC QTIPPVGEQELGVADGQLASSLRTVSSQRVLAVHTNSGATLVISQRLEPTREVLDRLAWL CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHH LFVVGGCGVVLAAAAGTAVGRTGLRPIARLTAATERIARTDDLTPIPVTGDDELARLTES HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH FNTMLRALAESRDRQRRLVADAGHELRTPLTSLRTNMELLIASSRPGAPQLPEQDMAELR HHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH ADVVAQIEELSTLVGDLVDLAREDAPETVYDRVDLGEVAERALERARRRRADVEFVAELR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHCC PWFVYGHDAALERAILNVLDNAAKWSPAGEQVGVRMRETGRGLLELTVDDAGPGIPPEER CEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCEEEEEECCCCCCCCCHHH ELVFERFYRTTASRSMPGSGLGLAIVKQVVTKHGGTITIDTSDRGGACIRIVLPGETGAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCC GPGLDQRE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA