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The map label for this gene is 54026933

Identifier: 54026933

GI number: 54026933

Start: 5175668

End: 5176381

Strand: Reverse

Name: 54026933

Synonym: nfa49590

Alternate gene names: NA

Gene position: 5176381-5175668 (Counterclockwise)

Preceding gene: 54026934

Following gene: 54026932

Centisome position: 85.97

GC content: 67.09

Gene sequence:

>714_bases
ATGGTCGAGGTCGACTGTTTGAACCTGATGAGGGGAAGTATGAGCGAGAACCGCACCAAGGGCCTGCGCCACGGCGTCCG
CGCCGCGGGCGTCGGCGCGGCCGCGGCCGTGGCCATGGGCCTGCTTTCGACCGGTGCTGCCAACGCCGACACCTTCGTGC
CGTTGCCGGACGGCCAGAAGGTGGGACCGGGCGTCACTGTCACCCGCACCGGTGAGCACGCCATCGTGTCGCCGTCGATG
GCGGCCAACGGCGCCGGCCGCGTCGTCTGGGTCTCCGGAAACGCGTCGGCCGATGTCACGGTGACCCCGGAAGGCGAGGT
CGGTCCGAACAACGGGCCCACCGGCAACCCCGGCTCCAACAACTCGTCGACCCACGGCGCGTCCCAGCTGAACACCGGCT
ACATCGTCGGTTGCCAGGTCAGCATCGGTGACGACGCCATCTCCGCGGGCTTGGCCGGCGGTATCGACCTCAACGGCGGT
TCGATCGGTGGTTCGATCGGCCTGGACCTGGGTCCCGGCGAGGTGAAGTTCGTCCAGATCGATTACAAGGACATCCTGAA
GCCCGGCGTGTACTCCGTCGAGTACCAGGACGTGGAGATCGAGATCCAGGGTTGCGCGGGCTACGCCCAGGCGCGGTCCT
ACACCGTGGTCGAGATCATCGGTGACCACTACTCGAAGACCACGCTCTACGGCATGCCGTTCAGCATCGGCTGA

Upstream 100 bases:

>100_bases
CGACCCGGCCCGACGTAGCGCCGAAATAACAACCGGTTACGCACCGGCAACAAATGGGCGACACACTGGGCTGGGCCTGA
GAGGACCACCGTCCACCTCG

Downstream 100 bases:

>100_bases
CCTTCCACGAACTTCACGAACCTCCAATCGCGTGAGCGATTCAACCCTCGAAGGGTATGAAACACATGATCAACCGTAAG
AACCTGGCGCGGGTGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MVEVDCLNLMRGSMSENRTKGLRHGVRAAGVGAAAAVAMGLLSTGAANADTFVPLPDGQKVGPGVTVTRTGEHAIVSPSM
AANGAGRVVWVSGNASADVTVTPEGEVGPNNGPTGNPGSNNSSTHGASQLNTGYIVGCQVSIGDDAISAGLAGGIDLNGG
SIGGSIGLDLGPGEVKFVQIDYKDILKPGVYSVEYQDVEIEIQGCAGYAQARSYTVVEIIGDHYSKTTLYGMPFSIG

Sequences:

>Translated_237_residues
MVEVDCLNLMRGSMSENRTKGLRHGVRAAGVGAAAAVAMGLLSTGAANADTFVPLPDGQKVGPGVTVTRTGEHAIVSPSM
AANGAGRVVWVSGNASADVTVTPEGEVGPNNGPTGNPGSNNSSTHGASQLNTGYIVGCQVSIGDDAISAGLAGGIDLNGG
SIGGSIGLDLGPGEVKFVQIDYKDILKPGVYSVEYQDVEIEIQGCAGYAQARSYTVVEIIGDHYSKTTLYGMPFSIG
>Mature_237_residues
MVEVDCLNLMRGSMSENRTKGLRHGVRAAGVGAAAAVAMGLLSTGAANADTFVPLPDGQKVGPGVTVTRTGEHAIVSPSM
AANGAGRVVWVSGNASADVTVTPEGEVGPNNGPTGNPGSNNSSTHGASQLNTGYIVGCQVSIGDDAISAGLAGGIDLNGG
SIGGSIGLDLGPGEVKFVQIDYKDILKPGVYSVEYQDVEIEIQGCAGYAQARSYTVVEIIGDHYSKTTLYGMPFSIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23929; Mature: 23929

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEVDCLNLMRGSMSENRTKGLRHGVRAAGVGAAAAVAMGLLSTGAANADTFVPLPDGQK
CEEEHHHHHHHCCCCCHHHHHHHHCHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCC
VGPGVTVTRTGEHAIVSPSMAANGAGRVVWVSGNASADVTVTPEGEVGPNNGPTGNPGSN
CCCCEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
NSSTHGASQLNTGYIVGCQVSIGDDAISAGLAGGIDLNGGSIGGSIGLDLGPGEVKFVQI
CCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCCCEECCCCCCCCEEEEECCCCEEEEEEE
DYKDILKPGVYSVEYQDVEIEIQGCAGYAQARSYTVVEIIGDHYSKTTLYGMPFSIG
CHHHHCCCCEEEEEEEEEEEEEECCCCCHHHCCEEEEEEECCCCCCEEEECCCEECC
>Mature Secondary Structure
MVEVDCLNLMRGSMSENRTKGLRHGVRAAGVGAAAAVAMGLLSTGAANADTFVPLPDGQK
CEEEHHHHHHHCCCCCHHHHHHHHCHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCC
VGPGVTVTRTGEHAIVSPSMAANGAGRVVWVSGNASADVTVTPEGEVGPNNGPTGNPGSN
CCCCEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC
NSSTHGASQLNTGYIVGCQVSIGDDAISAGLAGGIDLNGGSIGGSIGLDLGPGEVKFVQI
CCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCCCEECCCCCCCCEEEEECCCCEEEEEEE
DYKDILKPGVYSVEYQDVEIEIQGCAGYAQARSYTVVEIIGDHYSKTTLYGMPFSIG
CHHHHCCCCEEEEEEEEEEEEEECCCCCHHHCCEEEEEEECCCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA