| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026911
Identifier: 54026911
GI number: 54026911
Start: 5155965
End: 5156291
Strand: Reverse
Name: 54026911
Synonym: nfa49370
Alternate gene names: NA
Gene position: 5156291-5155965 (Counterclockwise)
Preceding gene: 54026912
Following gene: 54026910
Centisome position: 85.64
GC content: 59.02
Gene sequence:
>327_bases GTGTCAGACGAGTTGAGGGTCGCACTGACGGCTATGAACATGGCCGCGACCCATTGGCAGCTGGCGGCCGATCACCTCCA ATCGGGAGGTACATTGGCGGCCAGCCTGGAGATCGCGGCGACTGAAGCCGGCACATTCAACAAGGCTTTGGAAAAGTACA AGACCGTGCCGGGCTACTTTCGTGACCGGCTCTACGAGGGGGCCCAAGTTTTCAACGATATCGGTACAGCGCTCAACTAT GCGCGTCGCCAGTACGACGATCAGGACATAGCCAACCAGGGGCGAATACGGCAGTTGGAGGGACAAGTTGACGACGCCCA ACCCTGA
Upstream 100 bases:
>100_bases TTTTCGGTTAGGTACGACTACTCCCGCTACTCGGATGCAGATCTGGAATATCACCTGGATCGCCACCGGCTCCGCCTCCT GGAGGAAAGGGTCAAATAAC
Downstream 100 bases:
>100_bases AAACCAGCCCAACGCCGAAGAGCAAGCGTTGCTCGACAAGATTGCCTTTATCAGGTCGCAGATCGAGAAAATTGGTGATC TGCCGAGTCAGGTCGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSDELRVALTAMNMAATHWQLAADHLQSGGTLAASLEIAATEAGTFNKALEKYKTVPGYFRDRLYEGAQVFNDIGTALNY ARRQYDDQDIANQGRIRQLEGQVDDAQP
Sequences:
>Translated_108_residues MSDELRVALTAMNMAATHWQLAADHLQSGGTLAASLEIAATEAGTFNKALEKYKTVPGYFRDRLYEGAQVFNDIGTALNY ARRQYDDQDIANQGRIRQLEGQVDDAQP >Mature_107_residues SDELRVALTAMNMAATHWQLAADHLQSGGTLAASLEIAATEAGTFNKALEKYKTVPGYFRDRLYEGAQVFNDIGTALNYA RRQYDDQDIANQGRIRQLEGQVDDAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11950; Mature: 11819
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDELRVALTAMNMAATHWQLAADHLQSGGTLAASLEIAATEAGTFNKALEKYKTVPGYF CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCCHHH RDRLYEGAQVFNDIGTALNYARRQYDDQDIANQGRIRQLEGQVDDAQP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure SDELRVALTAMNMAATHWQLAADHLQSGGTLAASLEIAATEAGTFNKALEKYKTVPGYF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCCHHH RDRLYEGAQVFNDIGTALNYARRQYDDQDIANQGRIRQLEGQVDDAQP HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA