Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026910

Identifier: 54026910

GI number: 54026910

Start: 5155070

End: 5155984

Strand: Reverse

Name: 54026910

Synonym: nfa49360

Alternate gene names: NA

Gene position: 5155984-5155070 (Counterclockwise)

Preceding gene: 54026911

Following gene: 54026909

Centisome position: 85.63

GC content: 57.05

Gene sequence:

>915_bases
TTGACGACGCCCAACCCTGAAAACCAGCCCAACGCCGAAGAGCAAGCGTTGCTCGACAAGATTGCCTTTATCAGGTCGCA
GATCGAGAAAATTGGTGATCTGCCGAGTCAGGTCGATTCCTGGTGCGGGCGAATGGTGCAGATGATCCGCATGGACAGTA
TTGCCAGCGCGGGGTCCAAGGCATTGTCCAATGAGCGGATCATCGACATGATATGGGAGGAACGGGACAGGGTGAACGGA
GCGCTTCGGGATTCCTGGAGCGAGCTCAAGAAGGTTGACCCCGACCTGGAGGTTCCAGTCACGTTCATTCGCGTGGCCAA
TGAGTGGCGGAACGTGAAGACTGCTGTTCTGCAAGCGGAATCCGACTACCAGAAGACCATTCTGAGTACGGAATGGCATG
GGGACGCAGCAAGCCGATATGGCGGCATGCGTAACACGCAAGAGCTGGCGTTGAGCAGTCTGATCACGACGTTCGAGGAC
ATAGCGGAGAGTCTGGACACCATCGCGAAGGCCGAACTAATGCTCTATGTAGAATTGGCTGACAAGGTTCAGGAGCTCGA
ACAGAACGTAGTGGAGTCCGTTGGCGATCTGCGAGACGTGTTGGTGCTTCCGCTGGGTCCCTTGAGCGCCGTGGCCGAAT
TGGCCAACGTGGCGGAGGCTGCGAGGACATTCATTGTGGGGACGATCGGTACAATGGCGGATAGTGCGGCAACCATGATG
ATCGAGAGCAACAAAATCGAGCAGAATGAAGGCTATCAAAGCGGGCTTCCTGATAACAAGTGGCCACCCGGCGTAAAGGG
TGCATATGGCAACGGGCTCGATGGAATAAAGAACGCGATCGGCGACGCGACGGCCGACGACGGAGACAAGTCCGACTGGG
AGTTGGGTCCGGCGCCGGTGGTGGTCGCGCAATGA

Upstream 100 bases:

>100_bases
GTTTTCAACGATATCGGTACAGCGCTCAACTATGCGCGTCGCCAGTACGACGATCAGGACATAGCCAACCAGGGGCGAAT
ACGGCAGTTGGAGGGACAAG

Downstream 100 bases:

>100_bases
GGATGATTCTCACGGCTGTAGGAGTGTCCGGAGTAATTGCTCTTGCGACCGGGTGCTCCGACATCCAGTCCACACCCTCA
ACGCCAACCGTTTCGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTTPNPENQPNAEEQALLDKIAFIRSQIEKIGDLPSQVDSWCGRMVQMIRMDSIASAGSKALSNERIIDMIWEERDRVNG
ALRDSWSELKKVDPDLEVPVTFIRVANEWRNVKTAVLQAESDYQKTILSTEWHGDAASRYGGMRNTQELALSSLITTFED
IAESLDTIAKAELMLYVELADKVQELEQNVVESVGDLRDVLVLPLGPLSAVAELANVAEAARTFIVGTIGTMADSAATMM
IESNKIEQNEGYQSGLPDNKWPPGVKGAYGNGLDGIKNAIGDATADDGDKSDWELGPAPVVVAQ

Sequences:

>Translated_304_residues
MTTPNPENQPNAEEQALLDKIAFIRSQIEKIGDLPSQVDSWCGRMVQMIRMDSIASAGSKALSNERIIDMIWEERDRVNG
ALRDSWSELKKVDPDLEVPVTFIRVANEWRNVKTAVLQAESDYQKTILSTEWHGDAASRYGGMRNTQELALSSLITTFED
IAESLDTIAKAELMLYVELADKVQELEQNVVESVGDLRDVLVLPLGPLSAVAELANVAEAARTFIVGTIGTMADSAATMM
IESNKIEQNEGYQSGLPDNKWPPGVKGAYGNGLDGIKNAIGDATADDGDKSDWELGPAPVVVAQ
>Mature_303_residues
TTPNPENQPNAEEQALLDKIAFIRSQIEKIGDLPSQVDSWCGRMVQMIRMDSIASAGSKALSNERIIDMIWEERDRVNGA
LRDSWSELKKVDPDLEVPVTFIRVANEWRNVKTAVLQAESDYQKTILSTEWHGDAASRYGGMRNTQELALSSLITTFEDI
AESLDTIAKAELMLYVELADKVQELEQNVVESVGDLRDVLVLPLGPLSAVAELANVAEAARTFIVGTIGTMADSAATMMI
ESNKIEQNEGYQSGLPDNKWPPGVKGAYGNGLDGIKNAIGDATADDGDKSDWELGPAPVVVAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33166; Mature: 33034

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPNPENQPNAEEQALLDKIAFIRSQIEKIGDLPSQVDSWCGRMVQMIRMDSIASAGSK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSNERIIDMIWEERDRVNGALRDSWSELKKVDPDLEVPVTFIRVANEWRNVKTAVLQAE
HHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SDYQKTILSTEWHGDAASRYGGMRNTQELALSSLITTFEDIAESLDTIAKAELMLYVELA
HHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKVQELEQNVVESVGDLRDVLVLPLGPLSAVAELANVAEAARTFIVGTIGTMADSAATMM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IESNKIEQNEGYQSGLPDNKWPPGVKGAYGNGLDGIKNAIGDATADDGDKSDWELGPAPV
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCE
VVAQ
EECC
>Mature Secondary Structure 
TTPNPENQPNAEEQALLDKIAFIRSQIEKIGDLPSQVDSWCGRMVQMIRMDSIASAGSK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSNERIIDMIWEERDRVNGALRDSWSELKKVDPDLEVPVTFIRVANEWRNVKTAVLQAE
HHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SDYQKTILSTEWHGDAASRYGGMRNTQELALSSLITTFEDIAESLDTIAKAELMLYVELA
HHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKVQELEQNVVESVGDLRDVLVLPLGPLSAVAELANVAEAARTFIVGTIGTMADSAATMM
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IESNKIEQNEGYQSGLPDNKWPPGVKGAYGNGLDGIKNAIGDATADDGDKSDWELGPAPV
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCE
VVAQ
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA