| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is gshA
Identifier: 54026861
GI number: 54026861
Start: 5100641
End: 5101957
Strand: Reverse
Name: gshA
Synonym: nfa48870
Alternate gene names: NA
Gene position: 5101957-5100641 (Counterclockwise)
Preceding gene: 54026867
Following gene: 54026860
Centisome position: 84.73
GC content: 75.93
Gene sequence:
>1317_bases ATGGCGGTCACACTCGAACAGCAGGGGTCCACCGGCCGGGTCGATCCCGCGACGTTGTCCTCCCGCGCGGCCGCCGAGGC CTTCGTCGGCGGCGTGTGTTTCAAGCTCGGGCCACCCGCGCTGATCGGCGCCGAACTCGAGTGGCTCACCGTGCAGGGTG GGCCGTCGGCGTCCGCCACCGTCGCGGCACCACGTCCGCAACTGTCCGCCCTCGCCGCCGCCCTCGGACCGCACGCCCCG CGGTCCATCGCCCCCGACTCGCCCGCGCTGCCGCTGCCCGGCGGCAGCAGGATCACCGTCGAACCCGGTGGTCAGATCGA ATTGTCCAGCGCGCCGTATGCCGAGGCCGCCGAACTGTGCGCCCGCCTGCGCGAAGACGCGATCGTGCTGCGCGAGATGC TGGCCGCCGCCGCGATCCGGCCGCTCGCCCTCGCCGCCGACGCCGACCGCCGCGCCAAACGCCTGCTCCGCTCGCCCCGA TACCGGGCGATGGAGCAGTCCTTCGCCGGCATCGGCCCGTTCGGCAAGCTGATGATGTGCAATACGGCCGCCACGCAGGT CAGCGTGGACGCCGGGACCGACCCCGCCGAGGTCCGGGCCCGCTGGACCGCCCTGTACACGATGGGCCCCGCACTGGTCG CCGCGTTCGCCTGCTCACCGGCGCTGCGCGGCGCGCCGCCGGGGCGGTGGGCCTCCCAGCGGATGCGGACCTGGCTGCGC CTGGACACCCTGCGTACCCGGCCACCGGTCGCGGACTGGGCGGACCCGATCACCGGCTACGCGCGGTGGGCGCTGGACGT GCCGCTGTTGTGCGTGCGCTCGGTCGACGGCACGACGACCTGCGCCGGTGACCCGGGCGAGAACTGGACGGCGCCGCCGG GCGCGACCTTCGCCGACTGGATGGCGGGCGCGCTGGACGACGAGATCGGCCGCCGCCCCGATCCTGCCGATCTCGCCTAC CACCTGACCACCTTGTTCCCGCCGGTCCGCCCGTCCGGGCATCTCGAGGTGCGCTACCTCGACGCCCAGCCGGGGGAGGA CTGGACGGTGCCGATCCACACCTTCGACGCCCTGCTCGCGCACCCGGCCGTGGTCGCCGAGGCGACCGCGCTGGCCGCGC CGCTGGCCGACCAGTGGTCCCAGGCCGCGCGCTGCGGGCTCGCCGACGGCGTCGTGCGCACCGTCGCCGCCGAACTGCTC GACCTGGCGGCCGCGCATGCCCGCACGCCCGAGGCGGGCGCCGAGCTGGACCGCGCCGCGCGCCGCTGCCGGGCCGGGCG CACCCCCACCGAGGAGCCCGCGCGCGTGCATTCCTGA
Upstream 100 bases:
>100_bases GAGTTCGGCTTCGCGCCGTTTTCTTGTCGGTATCGATCGCTACGCTGGTTTGGGTCGAGTTCCTCGGGCAGCGGAGGCTT GCATGGCAGCGGAGGCTTGC
Downstream 100 bases:
>100_bases CCGACCGTCCCGCCGACCGATCCGCCGCGAGCCCGCTCGCGACCCTTCTCCCCGGGAGAGCGTTACCGTGACGAAGTCCT TCGCCCCCTCCGACCATTCC
Product: putative glutamylcysteine synthetase
Products: NA
Alternate protein names: Glutamate/Cysteine Ligase Family Protein; Glutamate/Cysteine Ligase; Gamma-Glutamylcysteine Synthetase; Glutamylcysteine Synthetase; Glutamate-Cysteine Ligase GSHA; Glutamate-Cysteine Ligase GshA; Glutamate-Cysteine Ligase Protein; Glutamate-Cysteine Ligase Gsha; Glutamate-Cysteine Ligase Protein
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MAVTLEQQGSTGRVDPATLSSRAAAEAFVGGVCFKLGPPALIGAELEWLTVQGGPSASATVAAPRPQLSALAAALGPHAP RSIAPDSPALPLPGGSRITVEPGGQIELSSAPYAEAAELCARLREDAIVLREMLAAAAIRPLALAADADRRAKRLLRSPR YRAMEQSFAGIGPFGKLMMCNTAATQVSVDAGTDPAEVRARWTALYTMGPALVAAFACSPALRGAPPGRWASQRMRTWLR LDTLRTRPPVADWADPITGYARWALDVPLLCVRSVDGTTTCAGDPGENWTAPPGATFADWMAGALDDEIGRRPDPADLAY HLTTLFPPVRPSGHLEVRYLDAQPGEDWTVPIHTFDALLAHPAVVAEATALAAPLADQWSQAARCGLADGVVRTVAAELL DLAAAHARTPEAGAELDRAARRCRAGRTPTEEPARVHS
Sequences:
>Translated_438_residues MAVTLEQQGSTGRVDPATLSSRAAAEAFVGGVCFKLGPPALIGAELEWLTVQGGPSASATVAAPRPQLSALAAALGPHAP RSIAPDSPALPLPGGSRITVEPGGQIELSSAPYAEAAELCARLREDAIVLREMLAAAAIRPLALAADADRRAKRLLRSPR YRAMEQSFAGIGPFGKLMMCNTAATQVSVDAGTDPAEVRARWTALYTMGPALVAAFACSPALRGAPPGRWASQRMRTWLR LDTLRTRPPVADWADPITGYARWALDVPLLCVRSVDGTTTCAGDPGENWTAPPGATFADWMAGALDDEIGRRPDPADLAY HLTTLFPPVRPSGHLEVRYLDAQPGEDWTVPIHTFDALLAHPAVVAEATALAAPLADQWSQAARCGLADGVVRTVAAELL DLAAAHARTPEAGAELDRAARRCRAGRTPTEEPARVHS >Mature_437_residues AVTLEQQGSTGRVDPATLSSRAAAEAFVGGVCFKLGPPALIGAELEWLTVQGGPSASATVAAPRPQLSALAAALGPHAPR SIAPDSPALPLPGGSRITVEPGGQIELSSAPYAEAAELCARLREDAIVLREMLAAAAIRPLALAADADRRAKRLLRSPRY RAMEQSFAGIGPFGKLMMCNTAATQVSVDAGTDPAEVRARWTALYTMGPALVAAFACSPALRGAPPGRWASQRMRTWLRL DTLRTRPPVADWADPITGYARWALDVPLLCVRSVDGTTTCAGDPGENWTAPPGATFADWMAGALDDEIGRRPDPADLAYH LTTLFPPVRPSGHLEVRYLDAQPGEDWTVPIHTFDALLAHPAVVAEATALAAPLADQWSQAARCGLADGVVRTVAAELLD LAAAHARTPEAGAELDRAARRCRAGRTPTEEPARVHS
Specific function: Unknown
COG id: COG3572
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46056; Mature: 45925
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTLEQQGSTGRVDPATLSSRAAAEAFVGGVCFKLGPPALIGAELEWLTVQGGPSASAT CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEECCCEEEEEEECCCCCCCE VAAPRPQLSALAAALGPHAPRSIAPDSPALPLPGGSRITVEPGGQIELSSAPYAEAAELC EECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHH ARLREDAIVLREMLAAAAIRPLALAADADRRAKRLLRSPRYRAMEQSFAGIGPFGKLMMC HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEE NTAATQVSVDAGTDPAEVRARWTALYTMGPALVAAFACSPALRGAPPGRWASQRMRTWLR ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHH LDTLRTRPPVADWADPITGYARWALDVPLLCVRSVDGTTTCAGDPGENWTAPPGATFADW HHHHCCCCCCHHHHCHHHHHHHHHHCCCHHEEECCCCCEECCCCCCCCCCCCCCCHHHHH MAGALDDEIGRRPDPADLAYHLTTLFPPVRPSGHLEVRYLDAQPGEDWTVPIHTFDALLA HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHH HPAVVAEATALAAPLADQWSQAARCGLADGVVRTVAAELLDLAAAHARTPEAGAELDRAA CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RRCRAGRTPTEEPARVHS HHHHCCCCCCCCCCCCCC >Mature Secondary Structure AVTLEQQGSTGRVDPATLSSRAAAEAFVGGVCFKLGPPALIGAELEWLTVQGGPSASAT EEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCEEECCCEEEEEEECCCCCCCE VAAPRPQLSALAAALGPHAPRSIAPDSPALPLPGGSRITVEPGGQIELSSAPYAEAAELC EECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCHHHHHHH ARLREDAIVLREMLAAAAIRPLALAADADRRAKRLLRSPRYRAMEQSFAGIGPFGKLMMC HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEE NTAATQVSVDAGTDPAEVRARWTALYTMGPALVAAFACSPALRGAPPGRWASQRMRTWLR ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHH LDTLRTRPPVADWADPITGYARWALDVPLLCVRSVDGTTTCAGDPGENWTAPPGATFADW HHHHCCCCCCHHHHCHHHHHHHHHHCCCHHEEECCCCCEECCCCCCCCCCCCCCCHHHHH MAGALDDEIGRRPDPADLAYHLTTLFPPVRPSGHLEVRYLDAQPGEDWTVPIHTFDALLA HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHH HPAVVAEATALAAPLADQWSQAARCGLADGVVRTVAAELLDLAAAHARTPEAGAELDRAA CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RRCRAGRTPTEEPARVHS HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA