Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026783

Identifier: 54026783

GI number: 54026783

Start: 5023580

End: 5023852

Strand: Reverse

Name: 54026783

Synonym: nfa48090

Alternate gene names: NA

Gene position: 5023852-5023580 (Counterclockwise)

Preceding gene: 54026787

Following gene: 54026781

Centisome position: 83.44

GC content: 65.93

Gene sequence:

>273_bases
ATGGCCGGTTACGAGGACCTCGAGAAGCTGTCGTCGAAGGAACTGCACGACCGCGCGGTCAAGACGGCCGTGCGGCACGG
CGACGTCAAATACCTGTGGGATCTGCTCACCCGCATCCCCGCCGCCGAGGCCGCCGCGGGCAATGTCGGCGAGAGCGAGG
CCGACATCAAATACGTGCTGCCGTTGATCGACGACTACATCCACGCCGGTGACGGCGCGGTGGCCGACCAGCTGCGCCCC
TTCTACATCCAGTACCTGGCCGAGCACTCCTGA

Upstream 100 bases:

>100_bases
GGGTAGGCGTGTCGGTGAAGTTCCCGTTAACACGCAGCTCACCGGGGCTGTGCCGAAGAACTCGCGGCGGCGTTCGGCGG
CGCCGGTTAGAGTCGCGGAC

Downstream 100 bases:

>100_bases
CCCGACCGCGCCGAGCACTCCCGGCGCGACCCCTCAGCGTCGCGGCAGCAGCGCGCGGACCAGGCCCACGGCCGTGCCGC
GCAGGACGTTCTCCCAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAGYEDLEKLSSKELHDRAVKTAVRHGDVKYLWDLLTRIPAAEAAAGNVGESEADIKYVLPLIDDYIHAGDGAVADQLRP
FYIQYLAEHS

Sequences:

>Translated_90_residues
MAGYEDLEKLSSKELHDRAVKTAVRHGDVKYLWDLLTRIPAAEAAAGNVGESEADIKYVLPLIDDYIHAGDGAVADQLRP
FYIQYLAEHS
>Mature_89_residues
AGYEDLEKLSSKELHDRAVKTAVRHGDVKYLWDLLTRIPAAEAAAGNVGESEADIKYVLPLIDDYIHAGDGAVADQLRPF
YIQYLAEHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9986; Mature: 9855

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGYEDLEKLSSKELHDRAVKTAVRHGDVKYLWDLLTRIPAAEAAAGNVGESEADIKYVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHH
PLIDDYIHAGDGAVADQLRPFYIQYLAEHS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGYEDLEKLSSKELHDRAVKTAVRHGDVKYLWDLLTRIPAAEAAAGNVGESEADIKYVL
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHH
PLIDDYIHAGDGAVADQLRPFYIQYLAEHS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA