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The map label for this gene is 54026757

Identifier: 54026757

GI number: 54026757

Start: 4993024

End: 4993398

Strand: Reverse

Name: 54026757

Synonym: nfa47830

Alternate gene names: NA

Gene position: 4993398-4993024 (Counterclockwise)

Preceding gene: 54026759

Following gene: 54026756

Centisome position: 82.93

GC content: 69.07

Gene sequence:

>375_bases
GTGCGCGACGCCATGGACGGCGCGGGAACCTTCACCGAGTTCCAGCAGCGGCTCGGGATCGCCCGGAACATCCTGTCGGA
TCGACTGCGCCGATTGGTCGACAACGGCATCCTCACCACCAGCACGCCGCCCGGCGGCAAGCGTCACACCTACGCCCTCA
CCGAAGCAGGTCAAGACCTCTTCGCCGCCATCGTGGCGTTACGGCAGTGGGGAGAGCGCCACGCCTTCGTGGCGAACGAA
CCGCGCTCGGTCCTGGTGGATCGGGACGGCAGCCCCGTCGCGCCGCTGCGTATCGAAAACCGGGAAGGACAGCCGGTCAC
CGCGGTGACGGCCCGGGTGCGCAAGGTTCCCGACGCGGCGATCCGGCACCGATGA

Upstream 100 bases:

>100_bases
GCTGATGGCCGTGGTGCCTACTGCGCGGGAGTGGACCGATCCCACCTGCCCCGTGGCGCGCACCATCGATCTCGTGGGTG
ATCGGTGGAGCCTGCTGATC

Downstream 100 bases:

>100_bases
GTTCTCCGGTCGGCGGGCGTCAGTAGTCCCATGGGAACTCTGATCTTTGTCGCGACAATCTCCCTCGACGGCTATGTCAA
CGACGCGACCGGTGACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRDAMDGAGTFTEFQQRLGIARNILSDRLRRLVDNGILTTSTPPGGKRHTYALTEAGQDLFAAIVALRQWGERHAFVANE
PRSVLVDRDGSPVAPLRIENREGQPVTAVTARVRKVPDAAIRHR

Sequences:

>Translated_124_residues
MRDAMDGAGTFTEFQQRLGIARNILSDRLRRLVDNGILTTSTPPGGKRHTYALTEAGQDLFAAIVALRQWGERHAFVANE
PRSVLVDRDGSPVAPLRIENREGQPVTAVTARVRKVPDAAIRHR
>Mature_124_residues
MRDAMDGAGTFTEFQQRLGIARNILSDRLRRLVDNGILTTSTPPGGKRHTYALTEAGQDLFAAIVALRQWGERHAFVANE
PRSVLVDRDGSPVAPLRIENREGQPVTAVTARVRKVPDAAIRHR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13711; Mature: 13711

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAMDGAGTFTEFQQRLGIARNILSDRLRRLVDNGILTTSTPPGGKRHTYALTEAGQDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHCCHHH
FAAIVALRQWGERHAFVANEPRSVLVDRDGSPVAPLRIENREGQPVTAVTARVRKVPDAA
HHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHH
IRHR
HCCC
>Mature Secondary Structure
MRDAMDGAGTFTEFQQRLGIARNILSDRLRRLVDNGILTTSTPPGGKRHTYALTEAGQDL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEHHHCCHHH
FAAIVALRQWGERHAFVANEPRSVLVDRDGSPVAPLRIENREGQPVTAVTARVRKVPDAA
HHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHH
IRHR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]