Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026755

Identifier: 54026755

GI number: 54026755

Start: 4990896

End: 4992314

Strand: Reverse

Name: 54026755

Synonym: nfa47810

Alternate gene names: NA

Gene position: 4992314-4990896 (Counterclockwise)

Preceding gene: 54026756

Following gene: 54026752

Centisome position: 82.91

GC content: 66.38

Gene sequence:

>1419_bases
GTGGTGGATTTCGTCGGCCGTCGGCAGGAACTGGCGATTCTGGAGCGCGAGCTGCAGAAAATCGTGGACGGGGTCGAGGG
AGAGCGGCCCGGACGGTGCGTGATGCTGCGTGGGCGTCGCCGCGTAGGTAAGTCGCGACTCGTGGAGCAGTTCGTGGAAG
GATCGGGAGCGCCCTTTCTGTTCTACGCGGCCACTGGCGCATCCCCTCGGGATGACCTGGCCCGGTTGGCGCGGGACGCC
GAGACTTCGACGCTGCCGTCGGCGCAGCTGGTGGCAGCCGCACGCCCCGAGAGCTGGGATGCTGCCTTCGACGTGTTGGC
CGCGGCGTTGCCGGAGGACCGGGCGAGCGTGCTGGTCATCGACGAAGTTCCGTATCTCATGGATGCCGCTGGCGCCTTCG
AGGGAATGTTGCAGCGAAGCTGGGATCGAGCCCTCGAGCGCAAGCCTGTCCTACTGATACTCATCGGATCGGACCTGTCG
ATGATGGAGGCGCTCAACAGCTACGGGCGCCCGTTCCATCAACGGGGTAGGGAGATGGTCCTGGGACCGCTGAATCCCGC
CGAGGTCGGGCGCATGCTCGGACTGGATCCGGCGGAGGCGTTCGATGCCGCACTGGTCACCGGAGGGCTGCCGTTGATCT
GCGCGGAGTGGCCTCGAGGAGAGGGTCTTTGGAGCTTTCTCGCGGAGGCGCTCAACGACCCGGTCTCGGCCCTGTTGGTG
TCGGCCGAACGCTCGCTGGCCGCCGAGTTCCCCCCGCAGGCTCAAGCCCGTACGGTGCTGTCGGCCATCGGCAGCGGCGA
GCGAACCTTCACCAACATCGCCCACGCTGCTGGTGGAATCGGAGCCGCACCATTACAGCGAGCATTGGAACTGCTGATCG
ACAAACGGATCGTCGCCGCGGAGCTGCCCGTTTCACTACGCCCGTCGAAGGATCGCCGTTACCGGGTGACCGACCCCTAC
TTGCGGTTCTGGCTCCATCTGCTCGGCCCTTCGATGGAGGAGATCGAGCGCGGGCGAGGCGATCTGACTTTGGCGCGGAT
CCGGGAGAAATGGACCAGCTGGCGTGGCCGTGCGATCGAGCCGCTCATCCGTGAAGCGATCGCCCGGATTCTGCCCGACG
ACCGGCTTCCGGCCGCGCGAGCGGTCGGCGGGTATTGGACACGCAGCAACGACGTCGAGATCGACATCGTTGGCGCCGAC
CGTGCACCTGTCGCGAAGGAACTGCTGTTCGTCGGCTCCATCAAGTGGTTGGAGAATTCACCCTTCGACCGGCACGACCA
CGCCGCTCTGAACCGCCACCGCGCTGCTCTCACCGATGAACCCGTCCGCATGGTGGCCGTATCGCGCAGCGGTGTGGACT
GTCCGGGGCTCGACGCGGTCTATGGGCCGGGCGATTTGCTGGGCGCCTGGCCGCTGTAG

Upstream 100 bases:

>100_bases
CTGTATGACCCCGCCCAGGCTTCCGCGGGAAGTACTAACATAGAAGTTACTAACATTGATGTTAGTAACTTGATTGTTAG
TGTGAGGTGGTGGGCTGGTC

Downstream 100 bases:

>100_bases
ACGCGAGTCCAGGGCTGGGATCGTGCTGAGTCCGAAGGGCCCTGTCGACAGGTCTCACGCGCGCGGAACTTTCGCGGGCG
CTGCCGCTGCGGCAACACGA

Product: hypothetical protein

Products: NA

Alternate protein names: DEXX-Box ATPase; Dexx-Box ATPase; Archaeal ATPase Fused C-Terminal Domain; Archaeal ATPase Family Protein; Prokaryotic ATPase AAA Superfamily; Aaa+ Superfamily ATPase; Archaeal ATPase Family

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MVDFVGRRQELAILERELQKIVDGVEGERPGRCVMLRGRRRVGKSRLVEQFVEGSGAPFLFYAATGASPRDDLARLARDA
ETSTLPSAQLVAAARPESWDAAFDVLAAALPEDRASVLVIDEVPYLMDAAGAFEGMLQRSWDRALERKPVLLILIGSDLS
MMEALNSYGRPFHQRGREMVLGPLNPAEVGRMLGLDPAEAFDAALVTGGLPLICAEWPRGEGLWSFLAEALNDPVSALLV
SAERSLAAEFPPQAQARTVLSAIGSGERTFTNIAHAAGGIGAAPLQRALELLIDKRIVAAELPVSLRPSKDRRYRVTDPY
LRFWLHLLGPSMEEIERGRGDLTLARIREKWTSWRGRAIEPLIREAIARILPDDRLPAARAVGGYWTRSNDVEIDIVGAD
RAPVAKELLFVGSIKWLENSPFDRHDHAALNRHRAALTDEPVRMVAVSRSGVDCPGLDAVYGPGDLLGAWPL

Sequences:

>Translated_472_residues
MVDFVGRRQELAILERELQKIVDGVEGERPGRCVMLRGRRRVGKSRLVEQFVEGSGAPFLFYAATGASPRDDLARLARDA
ETSTLPSAQLVAAARPESWDAAFDVLAAALPEDRASVLVIDEVPYLMDAAGAFEGMLQRSWDRALERKPVLLILIGSDLS
MMEALNSYGRPFHQRGREMVLGPLNPAEVGRMLGLDPAEAFDAALVTGGLPLICAEWPRGEGLWSFLAEALNDPVSALLV
SAERSLAAEFPPQAQARTVLSAIGSGERTFTNIAHAAGGIGAAPLQRALELLIDKRIVAAELPVSLRPSKDRRYRVTDPY
LRFWLHLLGPSMEEIERGRGDLTLARIREKWTSWRGRAIEPLIREAIARILPDDRLPAARAVGGYWTRSNDVEIDIVGAD
RAPVAKELLFVGSIKWLENSPFDRHDHAALNRHRAALTDEPVRMVAVSRSGVDCPGLDAVYGPGDLLGAWPL
>Mature_472_residues
MVDFVGRRQELAILERELQKIVDGVEGERPGRCVMLRGRRRVGKSRLVEQFVEGSGAPFLFYAATGASPRDDLARLARDA
ETSTLPSAQLVAAARPESWDAAFDVLAAALPEDRASVLVIDEVPYLMDAAGAFEGMLQRSWDRALERKPVLLILIGSDLS
MMEALNSYGRPFHQRGREMVLGPLNPAEVGRMLGLDPAEAFDAALVTGGLPLICAEWPRGEGLWSFLAEALNDPVSALLV
SAERSLAAEFPPQAQARTVLSAIGSGERTFTNIAHAAGGIGAAPLQRALELLIDKRIVAAELPVSLRPSKDRRYRVTDPY
LRFWLHLLGPSMEEIERGRGDLTLARIREKWTSWRGRAIEPLIREAIARILPDDRLPAARAVGGYWTRSNDVEIDIVGAD
RAPVAKELLFVGSIKWLENSPFDRHDHAALNRHRAALTDEPVRMVAVSRSGVDCPGLDAVYGPGDLLGAWPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51688; Mature: 51688

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDFVGRRQELAILERELQKIVDGVEGERPGRCVMLRGRRRVGKSRLVEQFVEGSGAPFL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCHHHHHHHHHCCCCCCEE
FYAATGASPRDDLARLARDAETSTLPSAQLVAAARPESWDAAFDVLAAALPEDRASVLVI
EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEE
DEVPYLMDAAGAFEGMLQRSWDRALERKPVLLILIGSDLSMMEALNSYGRPFHQRGREMV
ECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHCCCEEE
LGPLNPAEVGRMLGLDPAEAFDAALVTGGLPLICAEWPRGEGLWSFLAEALNDPVSALLV
ECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCHHHHHHH
SAERSLAAEFPPQAQARTVLSAIGSGERTFTNIAHAAGGIGAAPLQRALELLIDKRIVAA
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHE
ELPVSLRPSKDRRYRVTDPYLRFWLHLLGPSMEEIERGRGDLTLARIREKWTSWRGRAIE
CCCCCCCCCCCCCEECCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
PLIREAIARILPDDRLPAARAVGGYWTRSNDVEIDIVGADRAPVAKELLFVGSIKWLENS
HHHHHHHHHHCCCCCCCHHHHCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
PFDRHDHAALNRHRAALTDEPVRMVAVSRSGVDCPGLDAVYGPGDLLGAWPL
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVDFVGRRQELAILERELQKIVDGVEGERPGRCVMLRGRRRVGKSRLVEQFVEGSGAPFL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHCCHHHHHHHHHCCCCCCEE
FYAATGASPRDDLARLARDAETSTLPSAQLVAAARPESWDAAFDVLAAALPEDRASVLVI
EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEE
DEVPYLMDAAGAFEGMLQRSWDRALERKPVLLILIGSDLSMMEALNSYGRPFHQRGREMV
ECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHCCCEEE
LGPLNPAEVGRMLGLDPAEAFDAALVTGGLPLICAEWPRGEGLWSFLAEALNDPVSALLV
ECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCHHHHHHH
SAERSLAAEFPPQAQARTVLSAIGSGERTFTNIAHAAGGIGAAPLQRALELLIDKRIVAA
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHE
ELPVSLRPSKDRRYRVTDPYLRFWLHLLGPSMEEIERGRGDLTLARIREKWTSWRGRAIE
CCCCCCCCCCCCCEECCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCHH
PLIREAIARILPDDRLPAARAVGGYWTRSNDVEIDIVGADRAPVAKELLFVGSIKWLENS
HHHHHHHHHHCCCCCCCHHHHCCCCEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
PFDRHDHAALNRHRAALTDEPVRMVAVSRSGVDCPGLDAVYGPGDLLGAWPL
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA