Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026645

Identifier: 54026645

GI number: 54026645

Start: 4873757

End: 4874149

Strand: Reverse

Name: 54026645

Synonym: nfa46720

Alternate gene names: NA

Gene position: 4874149-4873757 (Counterclockwise)

Preceding gene: 54026647

Following gene: 54026644

Centisome position: 80.95

GC content: 69.72

Gene sequence:

>393_bases
GTGAGACGCCAGAACTTGGACGAAGGCGCGCTGAGCCCCATGCGCGACAGGCACTACCCGCACGGCGTCATCGAGGAGTT
GATGATGGGAGCTTACTCGGCATCTCGGTTGTCCGCCGCAGATCCGGTCGCCGAGACCCCTGCGCCCGCACCGACGCAGG
AGCCCGTGACCCACGCACCGGAATCCGCCGGCCGACCCGCCCGCGCGACATCCACGATCGTGTCGAAAACCCTGGCCTGG
CTGTTCTTCCTGGGCGGCCTGGTCGGCGCGGTCCTCGGCATCGCGAGCCTGCACGTCGAGATCACCGTCGCCGGGCTGAT
CCTGGCCTGCACGGCCGGGCTCGTCCTGCTCAAGATCCGCGCCGACCGCGCGATCGCCGCCGAAACCGCCTGA

Upstream 100 bases:

>100_bases
TGGACACTCCACATCACGGAATGATCTCGTCGGCGTGTCGCGGGCACGTGTCGTGGTGGGCGACGCCACGTGGTCGTAGC
GTGAGTGATCGAAGTTACGC

Downstream 100 bases:

>100_bases
GCGGGTCAGCGGCCGGAGACGGTAGCGCAGCGTCACCACGCAGGCCGCCCCGCTCGGGCGCAATCGGGCACCGCCTGAGC
GGGTCAGCGGCCGGAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRRQNLDEGALSPMRDRHYPHGVIEELMMGAYSASRLSAADPVAETPAPAPTQEPVTHAPESAGRPARATSTIVSKTLAW
LFFLGGLVGAVLGIASLHVEITVAGLILACTAGLVLLKIRADRAIAAETA

Sequences:

>Translated_130_residues
MRRQNLDEGALSPMRDRHYPHGVIEELMMGAYSASRLSAADPVAETPAPAPTQEPVTHAPESAGRPARATSTIVSKTLAW
LFFLGGLVGAVLGIASLHVEITVAGLILACTAGLVLLKIRADRAIAAETA
>Mature_130_residues
MRRQNLDEGALSPMRDRHYPHGVIEELMMGAYSASRLSAADPVAETPAPAPTQEPVTHAPESAGRPARATSTIVSKTLAW
LFFLGGLVGAVLGIASLHVEITVAGLILACTAGLVLLKIRADRAIAAETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13595; Mature: 13595

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRQNLDEGALSPMRDRHYPHGVIEELMMGAYSASRLSAADPVAETPAPAPTQEPVTHAP
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ESAGRPARATSTIVSKTLAWLFFLGGLVGAVLGIASLHVEITVAGLILACTAGLVLLKIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRAIAAETA
CCCCHHCCCC
>Mature Secondary Structure
MRRQNLDEGALSPMRDRHYPHGVIEELMMGAYSASRLSAADPVAETPAPAPTQEPVTHAP
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
ESAGRPARATSTIVSKTLAWLFFLGGLVGAVLGIASLHVEITVAGLILACTAGLVLLKIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRAIAAETA
CCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA