| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026644
Identifier: 54026644
GI number: 54026644
Start: 4872758
End: 4873585
Strand: Reverse
Name: 54026644
Synonym: nfa46710
Alternate gene names: NA
Gene position: 4873585-4872758 (Counterclockwise)
Preceding gene: 54026645
Following gene: 54026641
Centisome position: 80.94
GC content: 76.45
Gene sequence:
>828_bases GTGCGCATCGAGACGACCGCCGACGCCACCGCGTTCCGGGCCGCCGCGGGTCCGCTGCTGGCCGAGGATCCGCTGCGGCA CACCGTGATCGGCACTGCCGCCGCGGCCGGGGCCGCCCCCGACCGGCCGGGCCCGCTGTTCCTCACGGTGCGTGCCGACG ACGGCACCGTCGTCGGGGTCGCGATGCACACCCCGGGCTACCACGCCTACCTCGGTGCCATGCCGCCCGCGGCGATCGGA CCCGTCGCCGAGGCCGTGCTCGCCGCCGTGCCGGACAACGACGGTGTCGAAGGCGCCGCCGAGGACGCGCTCGCCTTCGC CCGGCACTGGGTCGGGGTGCGCGGGTGCGGGTATCGCCTGGAGCGGCGGTTGCGCCTGTACCGGCTGGGCGCACCGCGCC GACCGGTCGGGGTCCCCGGTGCGCCACGGCGTGCGGGACCGGCCGACGTGGCGTTGTGCGCGGAGTGGCTCGCGGCGTTC CGGACCGAGGTCGGCATGTCGGGGCCGTGGCCGGACCGCGCGGAACTGGCAGCGCGGATCGGGTCGGGGCGCTGGTGGCT GTGGGAGCACGACGGCGAGCGGGTCGCGCTGGTCGCCCATCAGGCGCCCACCGACGGCTGGTCGCGCATCGCGCCCGTCT ACACCCCGCCGCACGCCCGCGGGCACGGCTACGCCGCGGCGCTCACCGCGCACGTCTCGGTGCTGCTGGCCGAGCGCGGA AGCGGGGTCTGCCTGTTCACCGACCTCGACGACCCGGTGCCGAACCGGATCTATCCGCGGGTGGGGTACCTCCCGGTGCG GGACTTCGCCACCTACGTGTTCGACTGA
Upstream 100 bases:
>100_bases CGCCTGAGCGGGTCAGCGGCCGGAGGCGGTAGCGCAGCGTCACCACGCAGGCGACGAAAAAGCCGATGTCCCAGCGGCAT CCGCCGATTAGCCTGGCGGC
Downstream 100 bases:
>100_bases ACCGGCCGGCCTGTCGCGACGCGGGTGGTCCAGGCGAACGGGGTGGACTCGGTGCGCGCGCCCTCGGCGGTGCGGGAGCG GTTCGGCTCGTCCAGGTCGG
Product: putative acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase-Like Protein; FR47 Domain-Containing Protein; Acyltransferase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MRIETTADATAFRAAAGPLLAEDPLRHTVIGTAAAAGAAPDRPGPLFLTVRADDGTVVGVAMHTPGYHAYLGAMPPAAIG PVAEAVLAAVPDNDGVEGAAEDALAFARHWVGVRGCGYRLERRLRLYRLGAPRRPVGVPGAPRRAGPADVALCAEWLAAF RTEVGMSGPWPDRAELAARIGSGRWWLWEHDGERVALVAHQAPTDGWSRIAPVYTPPHARGHGYAAALTAHVSVLLAERG SGVCLFTDLDDPVPNRIYPRVGYLPVRDFATYVFD
Sequences:
>Translated_275_residues MRIETTADATAFRAAAGPLLAEDPLRHTVIGTAAAAGAAPDRPGPLFLTVRADDGTVVGVAMHTPGYHAYLGAMPPAAIG PVAEAVLAAVPDNDGVEGAAEDALAFARHWVGVRGCGYRLERRLRLYRLGAPRRPVGVPGAPRRAGPADVALCAEWLAAF RTEVGMSGPWPDRAELAARIGSGRWWLWEHDGERVALVAHQAPTDGWSRIAPVYTPPHARGHGYAAALTAHVSVLLAERG SGVCLFTDLDDPVPNRIYPRVGYLPVRDFATYVFD >Mature_275_residues MRIETTADATAFRAAAGPLLAEDPLRHTVIGTAAAAGAAPDRPGPLFLTVRADDGTVVGVAMHTPGYHAYLGAMPPAAIG PVAEAVLAAVPDNDGVEGAAEDALAFARHWVGVRGCGYRLERRLRLYRLGAPRRPVGVPGAPRRAGPADVALCAEWLAAF RTEVGMSGPWPDRAELAARIGSGRWWLWEHDGERVALVAHQAPTDGWSRIAPVYTPPHARGHGYAAALTAHVSVLLAERG SGVCLFTDLDDPVPNRIYPRVGYLPVRDFATYVFD
Specific function: Unknown
COG id: COG3393
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29215; Mature: 29215
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIETTADATAFRAAAGPLLAEDPLRHTVIGTAAAAGAAPDRPGPLFLTVRADDGTVVGV CEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEE AMHTPGYHAYLGAMPPAAIGPVAEAVLAAVPDNDGVEGAAEDALAFARHWVGVRGCGYRL EEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH ERRLRLYRLGAPRRPVGVPGAPRRAGPADVALCAEWLAAFRTEVGMSGPWPDRAELAARI HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GSGRWWLWEHDGERVALVAHQAPTDGWSRIAPVYTPPHARGHGYAAALTAHVSVLLAERG CCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEECC SGVCLFTDLDDPVPNRIYPRVGYLPVRDFATYVFD CCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHCC >Mature Secondary Structure MRIETTADATAFRAAAGPLLAEDPLRHTVIGTAAAAGAAPDRPGPLFLTVRADDGTVVGV CEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEE AMHTPGYHAYLGAMPPAAIGPVAEAVLAAVPDNDGVEGAAEDALAFARHWVGVRGCGYRL EEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHH ERRLRLYRLGAPRRPVGVPGAPRRAGPADVALCAEWLAAFRTEVGMSGPWPDRAELAARI HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GSGRWWLWEHDGERVALVAHQAPTDGWSRIAPVYTPPHARGHGYAAALTAHVSVLLAERG CCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEECC SGVCLFTDLDDPVPNRIYPRVGYLPVRDFATYVFD CCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA