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The map label for this gene is ychJ [C]

Identifier: 54026618

GI number: 54026618

Start: 4834428

End: 4834817

Strand: Reverse

Name: ychJ [C]

Synonym: nfa46450

Alternate gene names: 54026618

Gene position: 4834817-4834428 (Counterclockwise)

Preceding gene: 54026620

Following gene: 54026617

Centisome position: 80.3

GC content: 71.79

Gene sequence:

>390_bases
ATGAGCGCGCCCTCGAGCTGTCCCTGCCGCCGCGGTGAGCCGTTCGATCGTTGCTGCGGCCCGGTCCTGGCCGGGCAGCG
GCAGGCGGCCACGGCCGAGGCGCTGATGCGCTCGCGCTATGTCGCCTTCGCGGTCGGCGACGCGGACTATTTGCTGCGCT
CCTGGCATTCGCGGACCCGGCCGAAACGACTCTCCCTCGACCACGGCCTGCGCTGGCGCTTCCTGGAGATCGTGCGCACC
GAGCGCGGCGGCCCCTTCGACGACACCGGCGTGGTCGAGTTCGTCGCCCACTACCGCACCGACGAGGGCCGCGGCGAATT
GCACGAGGTGAGCCGGTTCGCCCGCGAGGACGGGCAGTGGCGGTACCTCGACGGCGACATCGAGGACTGA

Upstream 100 bases:

>100_bases
TGCGGGTGGGCCGTCGTCAAGTCCCCGCCGAATTTCGGTGCGAAATACCCCGCGGACCCCGCGGCGCCACCCCGGGCGCC
GCCGGTGTGAGAATCGCGGT

Downstream 100 bases:

>100_bases
CCGGCACCGAGGACCGCCCCGGCGTACCGTTCGCCGATTCGGTAGCGTCGGCGAGCATGTCACGGGTGGCGATCGAGTAC
TGCACGCAGTGCCGCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSAPSSCPCRRGEPFDRCCGPVLAGQRQAATAEALMRSRYVAFAVGDADYLLRSWHSRTRPKRLSLDHGLRWRFLEIVRT
ERGGPFDDTGVVEFVAHYRTDEGRGELHEVSRFAREDGQWRYLDGDIED

Sequences:

>Translated_129_residues
MSAPSSCPCRRGEPFDRCCGPVLAGQRQAATAEALMRSRYVAFAVGDADYLLRSWHSRTRPKRLSLDHGLRWRFLEIVRT
ERGGPFDDTGVVEFVAHYRTDEGRGELHEVSRFAREDGQWRYLDGDIED
>Mature_128_residues
SAPSSCPCRRGEPFDRCCGPVLAGQRQAATAEALMRSRYVAFAVGDADYLLRSWHSRTRPKRLSLDHGLRWRFLEIVRTE
RGGPFDDTGVVEFVAHYRTDEGRGELHEVSRFAREDGQWRYLDGDIED

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=124, Percent_Identity=36.2903225806452, Blast_Score=83, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023006 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14776; Mature: 14644

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPSSCPCRRGEPFDRCCGPVLAGQRQAATAEALMRSRYVAFAVGDADYLLRSWHSRTR
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCHHEEEECCHHHHHHHHHHHCC
PKRLSLDHGLRWRFLEIVRTERGGPFDDTGVVEFVAHYRTDEGRGELHEVSRFAREDGQW
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCE
RYLDGDIED
EEECCCCCC
>Mature Secondary Structure 
SAPSSCPCRRGEPFDRCCGPVLAGQRQAATAEALMRSRYVAFAVGDADYLLRSWHSRTR
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCHHEEEECCHHHHHHHHHHHCC
PKRLSLDHGLRWRFLEIVRTERGGPFDDTGVVEFVAHYRTDEGRGELHEVSRFAREDGQW
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCE
RYLDGDIED
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]