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The map label for this gene is 54026617

Identifier: 54026617

GI number: 54026617

Start: 4834078

End: 4834371

Strand: Reverse

Name: 54026617

Synonym: nfa46440

Alternate gene names: NA

Gene position: 4834371-4834078 (Counterclockwise)

Preceding gene: 54026618

Following gene: 54026615

Centisome position: 80.29

GC content: 70.07

Gene sequence:

>294_bases
ATGTCACGGGTGGCGATCGAGTACTGCACGCAGTGCCGCTGGATGTTGCGCGCGAGCTGGATGGCGCAGGAACTGCTCAG
CACCTTCGGCACCGACCTGACCGAGGTCGCGCTCGTGCCCGGTACGGGCGGGGTCTTCCGGATCACCGTCGACGGCGAGC
AGGTGTGGGAGCGCAAGGCCGACGGCGGCTTCCCCGAGATCACCGTGCTCAAGCAGCGCGTGCGCGACCGGGTCGCGCCG
GACCGTGACCTCGGCCACGCCGACCGCCACGTGAGCGGATCAGGCTCCGACTAG

Upstream 100 bases:

>100_bases
AGGACGGGCAGTGGCGGTACCTCGACGGCGACATCGAGGACTGACCGGCACCGAGGACCGCCCCGGCGTACCGTTCGCCG
ATTCGGTAGCGTCGGCGAGC

Downstream 100 bases:

>100_bases
GCGCAGCACCCGCCGCCGCAGCACCCGCCCCCGGCCGGTGCGGCCGGCGCGGCCTGGGCGGGGCCGGTGGCCTTGCCCAC
AGTCGCGAAGGTGGTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: SelT/SelW/SelH Selenoprotein; SelT/SelW/SelH; SelT/SelW/SelH Selenoprotein Domain; Selenoprotein W-Related Family; Selenoprotein W-Related Protein; SelT/SelW/SelH Domain-Containing Protein; SelT/SelW/SelH Selenodomain-Containing Protein; Selenoprotein W-Related; SelT/SelW/SelH Domain

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSRVAIEYCTQCRWMLRASWMAQELLSTFGTDLTEVALVPGTGGVFRITVDGEQVWERKADGGFPEITVLKQRVRDRVAP
DRDLGHADRHVSGSGSD

Sequences:

>Translated_97_residues
MSRVAIEYCTQCRWMLRASWMAQELLSTFGTDLTEVALVPGTGGVFRITVDGEQVWERKADGGFPEITVLKQRVRDRVAP
DRDLGHADRHVSGSGSD
>Mature_96_residues
SRVAIEYCTQCRWMLRASWMAQELLSTFGTDLTEVALVPGTGGVFRITVDGEQVWERKADGGFPEITVLKQRVRDRVAPD
RDLGHADRHVSGSGSD

Specific function: Unknown

COG id: COG3526

COG function: function code O; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10794; Mature: 10663

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVAIEYCTQCRWMLRASWMAQELLSTFGTDLTEVALVPGTGGVFRITVDGEQVWERKA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCEEEEEECHHHHHHHHC
DGGFPEITVLKQRVRDRVAPDRDLGHADRHVSGSGSD
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRVAIEYCTQCRWMLRASWMAQELLSTFGTDLTEVALVPGTGGVFRITVDGEQVWERKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCEEEEEECHHHHHHHHC
DGGFPEITVLKQRVRDRVAPDRDLGHADRHVSGSGSD
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA