Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026592

Identifier: 54026592

GI number: 54026592

Start: 4806392

End: 4806910

Strand: Reverse

Name: 54026592

Synonym: nfa46190

Alternate gene names: NA

Gene position: 4806910-4806392 (Counterclockwise)

Preceding gene: 54026593

Following gene: 54026591

Centisome position: 79.83

GC content: 75.53

Gene sequence:

>519_bases
GTGAGCGCGGAATCGCTGCACGCCTCCGCCACCGCCCTGCTGGAGGGCTGGTCGCCGCCGACGGGACCCGAGCGGTCGGT
GCGCGAGGCGATGCTCGCCTTTCTGGGCTCGGCGCCGCGCGGGTGTCTGCGGGAGCACGCCCCCGGCCACATCACCGCCT
CGGCGGTGGTGTTCTCCCACGACGGCCGGGAGGTGCTGTTGACCCTGCACCCGCGGGTCGGCCGCTGGATCCAGCTCGGC
GGGCACTGCGAGGAGCCGGACGAGACGGTGGCGGCCGCGGCGTTGCGCGAGGCCACCGAGGAGTCCGGCATCCCCGGCCT
GCACCTCGAGCCCGGCCTCTACGGCGCCCAGGCCCACCCCATCACCTGTTCCCTCGGCCGTCCCACCCGCCACCTCGACC
TCCTCTTCCGCCTGACCGCCCCACCCGGTGCCGTCCCGGTCCGCAGCCACGAGTCCACCGACCTGCGCTGGTGGCCGACC
GACGCCCTCCCGCCGAACGCCGACGTCCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
CCGCGGACTGGAACCCCTTGGGCGCCATCGCGGTCGGCTACCCGACCGAAGAGCTCGCACCTCGTCCGCCGCGCGATCCC
GGCGACGGGCTGGTCGAACG

Downstream 100 bases:

>100_bases
CCGCTGCCCGGGCGGGCGCCGCGGTACCCCGGCGGCCCCTGCCCGGGTGCTGTCGTCTCGGCCGCTGTCGGAGCCCGCGC
GGGTAACAGCTTTACAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Nudix Family Hydrolase; NTP Pyrophosphohydrolase; Hydrolase Nudix Family Protein; NUDIX Family Protein; LOW QUALITY PROTEIN NUDIX Hydrolase; Nudix Hydrolase Family Protein; ADP-Ribose Pyrophosphatase; (Di)Nucleoside Polyphosphate Hydrolase; (Di)Nucleoside Polyphosphate Hydrolase-Like Protein; Nudix Hydrolase; Nudix Superfamily Hydrolase

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSAESLHASATALLEGWSPPTGPERSVREAMLAFLGSAPRGCLREHAPGHITASAVVFSHDGREVLLTLHPRVGRWIQLG
GHCEEPDETVAAAALREATEESGIPGLHLEPGLYGAQAHPITCSLGRPTRHLDLLFRLTAPPGAVPVRSHESTDLRWWPT
DALPPNADVLLR

Sequences:

>Translated_172_residues
MSAESLHASATALLEGWSPPTGPERSVREAMLAFLGSAPRGCLREHAPGHITASAVVFSHDGREVLLTLHPRVGRWIQLG
GHCEEPDETVAAAALREATEESGIPGLHLEPGLYGAQAHPITCSLGRPTRHLDLLFRLTAPPGAVPVRSHESTDLRWWPT
DALPPNADVLLR
>Mature_171_residues
SAESLHASATALLEGWSPPTGPERSVREAMLAFLGSAPRGCLREHAPGHITASAVVFSHDGREVLLTLHPRVGRWIQLGG
HCEEPDETVAAAALREATEESGIPGLHLEPGLYGAQAHPITCSLGRPTRHLDLLFRLTAPPGAVPVRSHESTDLRWWPTD
ALPPNADVLLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18470; Mature: 18339

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAESLHASATALLEGWSPPTGPERSVREAMLAFLGSAPRGCLREHAPGHITASAVVFSH
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEEC
DGREVLLTLHPRVGRWIQLGGHCEEPDETVAAAALREATEESGIPGLHLEPGLYGAQAHP
CCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC
ITCSLGRPTRHLDLLFRLTAPPGAVPVRSHESTDLRWWPTDALPPNADVLLR
EEEECCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCCCCEEEC
>Mature Secondary Structure 
SAESLHASATALLEGWSPPTGPERSVREAMLAFLGSAPRGCLREHAPGHITASAVVFSH
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEEEEC
DGREVLLTLHPRVGRWIQLGGHCEEPDETVAAAALREATEESGIPGLHLEPGLYGAQAHP
CCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC
ITCSLGRPTRHLDLLFRLTAPPGAVPVRSHESTDLRWWPTDALPPNADVLLR
EEEECCCCCCEEEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA