Click here to switch to the map view.

The map label for this gene is mtrA [H]

Identifier: 54026584

GI number: 54026584

Start: 4799616

End: 4800293

Strand: Reverse

Name: mtrA [H]

Synonym: nfa46110

Alternate gene names: 54026584

Gene position: 4800293-4799616 (Counterclockwise)

Preceding gene: 54026585

Following gene: 54026583

Centisome position: 79.72

GC content: 68.73

Gene sequence:

>678_bases
ATGAAGCCGAAGATTCTGGTCGTCGACGACGATATGGCACTCGCGGAGATGCTCACGATCGTCCTGCGCGGGGAAGGGTT
CGACCCGCACGTGGTCGGCGACGGCACACAGGCCCTGGCGGCGGTCCGCGAGATCCGCCCCGATCTGGTCCTGCTGGACC
TGATGCTGCCCGGCATGAACGGCATCGACGTGTGCCGGGTGCTGCGGGCCGATTCCGGCGTTCCGATCGTCATGCTGACG
GCGAAGACGGACACCGTCGACGTCGTGCTCGGGCTCGAGTCCGGCGCCGACGACTACATCGTCAAGCCCTTCAAGCCGAA
GGAACTCGTCGCCCGCGTGCGCGCCCGGCTGCGCCGCACCGAGGAGGAGCCCGCGGAGCTGCTCTCGATCGCCGACATCG
TCATCGACGTGCCCGCGCACAAGGTGACCCGCGGCGGCCAGCAGATCTCGCTGACGCCGCTCGAGTTCGATCTGCTGGTG
GCGCTGGCCCGCAAGCCGCGCCAGGTGTTCACCCGCGAGGTGCTGCTCGAGCAGGTGTGGGGCTACCGGCACGCCGCGGA
CACCCGACTGGTGAACGTGCACGTGCAGCGGCTGCGCGCGAAGGTGGAGAAGGACCCGGAGAATCCTGAGATCGTGCTGA
CCGTTCGGGGGGTCGGCTACAAGGCCGGACCGCCGTGA

Upstream 100 bases:

>100_bases
GCCGAGCTGATCGGCCGCTAGGGTTGGATCCGCAGCGGGTTCGCCGCGGTGTTTGGCGTGGCGGCCCGATCCTCGCCTGG
GAGATGACAACATAGTAACT

Downstream 100 bases:

>100_bases
CCGATGGGGATGCGGAGCGTCCCGTCGGCGAGCAGGGCAGCGCGGCCTCCCGCGCCGCCGAGCCGAGCGGGACGATTCCC
CGTCTGGAGCGGTCGCTGGC

Product: putative two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALAAVREIRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLT
AKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRTEEEPAELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLV
ALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP

Sequences:

>Translated_225_residues
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALAAVREIRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLT
AKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRTEEEPAELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLV
ALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP
>Mature_225_residues
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALAAVREIRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLT
AKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRTEEEPAELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLV
ALARKPRQVFTREVLLEQVWGYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP

Specific function: Member of the two-component regulatory system mtrA/mtrB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=41.2556053811659, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=41.7777777777778, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=40.4444444444444, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1786784, Length=219, Percent_Identity=42.4657534246575, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=38.9908256880734, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=37.219730941704, Blast_Score=147, Evalue=5e-37,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=35.9090909090909, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI2367329, Length=225, Percent_Identity=39.1111111111111, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1790552, Length=218, Percent_Identity=34.4036697247706, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=33.9366515837104, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=34.4827586206897, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=33.1896551724138, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=30.1369863013699, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=35.5140186915888, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=36.5853658536585, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1790299, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322000, Length=101, Percent_Identity=31.6831683168317, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24828; Mature: 24828

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALAAVREIRPDLVLLDLMLPGMN
CCCCEEEEECCHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCEEEEEHHHCCCC
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRT
HHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHCC
EEEPAELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLVALARKPRQVFTREVLLEQVW
CCCHHHHHHHHHHHEECCCHHHHCCCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHH
GYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP
CCCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MKPKILVVDDDMALAEMLTIVLRGEGFDPHVVGDGTQALAAVREIRPDLVLLDLMLPGMN
CCCCEEEEECCHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCEEEEEHHHCCCC
GIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIVKPFKPKELVARVRARLRRT
HHHHHHHHHCCCCCCEEEEEECCCEEEEEEEECCCCCCCEECCCCHHHHHHHHHHHHHCC
EEEPAELLSIADIVIDVPAHKVTRGGQQISLTPLEFDLLVALARKPRQVFTREVLLEQVW
CCCHHHHHHHHHHHEECCCHHHHCCCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHHH
GYRHAADTRLVNVHVQRLRAKVEKDPENPEIVLTVRGVGYKAGPP
CCCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]