| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026544
Identifier: 54026544
GI number: 54026544
Start: 4753582
End: 4754202
Strand: Reverse
Name: 54026544
Synonym: nfa45710
Alternate gene names: NA
Gene position: 4754202-4753582 (Counterclockwise)
Preceding gene: 54026545
Following gene: 54026543
Centisome position: 78.96
GC content: 69.73
Gene sequence:
>621_bases GTGACCGAACTGTTCGCGGTGCTCGCCTACGGTGAGATCTCGGCCTTCTACCGGCTCGCGGAGGAAGCCAAGCTCTCGCC GACGCTGCGCGGCAAGGTCGCGGTGGCGGAGATGGCCGCGGCGGAGATGGCGCACTTCCGTACCCTGCAGCAGGCGATGG CCGAGCGCGGGGTGGACGTGTTCGACGCGATGGCGCCGTTCGTGCGAGCGCTGGACGACTACCACGCCTCCACCGATCCC TCGACCTGGCTCGAGTCGATGGTGAAGTTCTACGTCGGCGACGGGATCGCCGCGGACTTCTACACCGAGATCGCGGGCGC GCTCACCCCCGAGGTCACCGCGGTGGTGCGCGACGTGCTGGCCGAGACCAGCCACTCGGAGTTCGTGGTCGAGGAGGTGC GCCGGGCGGTCCGCGACAACCGCTCCGAGCGTGACCGGCTCACCCTGTGGGGCAGGCGCCTGCTCGGTGAGGCGATCACC CAGGCGCAGTACGTGATGGCCCAGCGCGACGAGCTCACCGAACTGGTGCTCACCGCGACCGGCGACCTCAACGGCATCGC GGCGTTGTTCGAGCGCATGCAGGCCAGCCACGCCCAGCGCATGGCGGTGCTCGGCATCTGA
Upstream 100 bases:
>100_bases CGCTACTCTTGGCGACATGGGAGCACAGTCATCCGCAGCGGTCGGTGTCTCGTCGTCGCAGCAGTCCGCGAGTCCGGCCA TTCCCGCCGAACATCCCGGC
Downstream 100 bases:
>100_bases GCGGCGCCGGGTTCGCTCAGAGCGCAGCGGTCGGTGTGCCGGGCCGGACACACGCTGCACTAGCCTGGTCCGGACAGCAC AGAACTCAAGGTTCGGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDVFDAMAPFVRALDDYHASTDP STWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVLAETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAIT QAQYVMAQRDELTELVLTATGDLNGIAALFERMQASHAQRMAVLGI
Sequences:
>Translated_206_residues MTELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDVFDAMAPFVRALDDYHASTDP STWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVLAETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAIT QAQYVMAQRDELTELVLTATGDLNGIAALFERMQASHAQRMAVLGI >Mature_205_residues TELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDVFDAMAPFVRALDDYHASTDPS TWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVLAETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAITQ AQYVMAQRDELTELVLTATGDLNGIAALFERMQASHAQRMAVLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22809; Mature: 22678
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDV CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FDAMAPFVRALDDYHASTDPSTWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH AETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAITQAQYVMAQRDELTELVLTAT HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLNGIAALFERMQASHAQRMAVLGI CCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FDAMAPFVRALDDYHASTDPSTWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH AETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAITQAQYVMAQRDELTELVLTAT HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GDLNGIAALFERMQASHAQRMAVLGI CCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA