Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026544

Identifier: 54026544

GI number: 54026544

Start: 4753582

End: 4754202

Strand: Reverse

Name: 54026544

Synonym: nfa45710

Alternate gene names: NA

Gene position: 4754202-4753582 (Counterclockwise)

Preceding gene: 54026545

Following gene: 54026543

Centisome position: 78.96

GC content: 69.73

Gene sequence:

>621_bases
GTGACCGAACTGTTCGCGGTGCTCGCCTACGGTGAGATCTCGGCCTTCTACCGGCTCGCGGAGGAAGCCAAGCTCTCGCC
GACGCTGCGCGGCAAGGTCGCGGTGGCGGAGATGGCCGCGGCGGAGATGGCGCACTTCCGTACCCTGCAGCAGGCGATGG
CCGAGCGCGGGGTGGACGTGTTCGACGCGATGGCGCCGTTCGTGCGAGCGCTGGACGACTACCACGCCTCCACCGATCCC
TCGACCTGGCTCGAGTCGATGGTGAAGTTCTACGTCGGCGACGGGATCGCCGCGGACTTCTACACCGAGATCGCGGGCGC
GCTCACCCCCGAGGTCACCGCGGTGGTGCGCGACGTGCTGGCCGAGACCAGCCACTCGGAGTTCGTGGTCGAGGAGGTGC
GCCGGGCGGTCCGCGACAACCGCTCCGAGCGTGACCGGCTCACCCTGTGGGGCAGGCGCCTGCTCGGTGAGGCGATCACC
CAGGCGCAGTACGTGATGGCCCAGCGCGACGAGCTCACCGAACTGGTGCTCACCGCGACCGGCGACCTCAACGGCATCGC
GGCGTTGTTCGAGCGCATGCAGGCCAGCCACGCCCAGCGCATGGCGGTGCTCGGCATCTGA

Upstream 100 bases:

>100_bases
CGCTACTCTTGGCGACATGGGAGCACAGTCATCCGCAGCGGTCGGTGTCTCGTCGTCGCAGCAGTCCGCGAGTCCGGCCA
TTCCCGCCGAACATCCCGGC

Downstream 100 bases:

>100_bases
GCGGCGCCGGGTTCGCTCAGAGCGCAGCGGTCGGTGTGCCGGGCCGGACACACGCTGCACTAGCCTGGTCCGGACAGCAC
AGAACTCAAGGTTCGGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDVFDAMAPFVRALDDYHASTDP
STWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVLAETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAIT
QAQYVMAQRDELTELVLTATGDLNGIAALFERMQASHAQRMAVLGI

Sequences:

>Translated_206_residues
MTELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDVFDAMAPFVRALDDYHASTDP
STWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVLAETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAIT
QAQYVMAQRDELTELVLTATGDLNGIAALFERMQASHAQRMAVLGI
>Mature_205_residues
TELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDVFDAMAPFVRALDDYHASTDPS
TWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVLAETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAITQ
AQYVMAQRDELTELVLTATGDLNGIAALFERMQASHAQRMAVLGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22809; Mature: 22678

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDV
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FDAMAPFVRALDDYHASTDPSTWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
AETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAITQAQYVMAQRDELTELVLTAT
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDLNGIAALFERMQASHAQRMAVLGI
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TELFAVLAYGEISAFYRLAEEAKLSPTLRGKVAVAEMAAAEMAHFRTLQQAMAERGVDV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FDAMAPFVRALDDYHASTDPSTWLESMVKFYVGDGIAADFYTEIAGALTPEVTAVVRDVL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
AETSHSEFVVEEVRRAVRDNRSERDRLTLWGRRLLGEAITQAQYVMAQRDELTELVLTAT
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDLNGIAALFERMQASHAQRMAVLGI
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA