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The map label for this gene is yycB [H]

Identifier: 54026536

GI number: 54026536

Start: 4745101

End: 4746267

Strand: Reverse

Name: yycB [H]

Synonym: nfa45630

Alternate gene names: 54026536

Gene position: 4746267-4745101 (Counterclockwise)

Preceding gene: 54026539

Following gene: 54026535

Centisome position: 78.83

GC content: 72.75

Gene sequence:

>1167_bases
GTGCTGGCCGCGATCGTGATGTCGGCCTCCGTACTGCGTGTCGCGGTCACCGCGTTCAGTCCGCTCGCCGAGCGCATCGG
CGCGGAGATCGGCTATTCGACCGCGGTCGTCGGCGTCTTCGGCATGATCCCCACCGCCATGTTCGCCGTCTCGGGCCTGC
TCACCCCGGCGCTCGTGCGCCGCGTCGGCCTGGAACGCACCGCCCTGATCGCCATGCTGCTGGCCGGCGCGGGCATGCTC
GTGCGCGCGCTGATGAGCAGCACCGCCGGGCTGCTGGTCTTCTCCGCGGTGGCCCTCGGTGGCATGGGCATCGGCAACGT
GGTGATCCCGCCCCTGGTCAAGCGCTACTTCCCGGACCGGCTCGCGGTGCTCAGCTCGCTCTACATCACCATGGTGCAGA
TCGGCACCGTGGTGCCCGCGCTGATCGCGGTCCCGGTGGCCGATTCGCACGGCTGGCGGATCTCCATCGGGCTGTGGGCC
CTGCTCGGCTTCGCCGCCGCGCTGCCCTGGCTCGGGGTGCTGCGCGGCCGCAAGGGCCACGATGTCGCCGACACCACCGC
CCTGCCGGCGGGCGGGCCCGCGCCCGGGCGGGTGTGGCGCTCGCCGGTGGCCTGGGGCATGGCGGGCATGTTCGGCATGA
CCTCGCTGACCACCTACGCGGTGTTCGCGTGGCTGCCGCGCGTGCTCGCCGACGCGGGCGCCGGTGATGCCTTCGGCGGC
ACGATGGTGGCGCTGTTCGCGCTCGTCGGCCTCGTCGCCGCGCTCTCGGCGCCGACCGTGGTGGCGCGGCTGGCCAACCC
GTTCCCGGTGGTGGTGGGCTGTGCGGCGCTGTTCCTCATCGCCTTCACCGGTCTGCTGGTGGCGCCGATGGGCGCGCCCG
TGCTCTGGGTGGTGATCCTCGGTCTCGGACCCAGCACCTTCCCGATGGCGCTGACGCTGATCAACATGCGCACCAAGACG
CCGCAGGGCTCGGCGGCGCTGTCCGGGTTCACCCAGGGCGTCGGTTACGCGGTCGCCTGCGTCGGCCCGCTGCTGTTCGG
CATGTTGCACACCGCCACCGGCGGCTGGCTCGCGCCCTTCGGGATGCTCACCGTGGCGGTCCTGGTGCTGCTGGCCGGCG
CCTGGCAGGCGTGCAAGCCGCGCATGCTCGAGGACACCTGGCACTGA

Upstream 100 bases:

>100_bases
ATCCTATGATTTCTCGGTGACAGCGACCTACTCTCCGGACACCGCGACCCCCGACACCACCCGCGAACGCAAGCGCGCCC
TGCTCGAAGGCCGCCTGCTG

Downstream 100 bases:

>100_bases
GCCGTTGCGCACCTGAACAACCCCGCGGGCCGCGCGACCGCGTACAGCGGTTGCGCGGTCGTGCGCGAGCGCGCATGCTG
TCCAGGTCACACTCACAGCG

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MLAAIVMSASVLRVAVTAFSPLAERIGAEIGYSTAVVGVFGMIPTAMFAVSGLLTPALVRRVGLERTALIAMLLAGAGML
VRALMSSTAGLLVFSAVALGGMGIGNVVIPPLVKRYFPDRLAVLSSLYITMVQIGTVVPALIAVPVADSHGWRISIGLWA
LLGFAAALPWLGVLRGRKGHDVADTTALPAGGPAPGRVWRSPVAWGMAGMFGMTSLTTYAVFAWLPRVLADAGAGDAFGG
TMVALFALVGLVAALSAPTVVARLANPFPVVVGCAALFLIAFTGLLVAPMGAPVLWVVILGLGPSTFPMALTLINMRTKT
PQGSAALSGFTQGVGYAVACVGPLLFGMLHTATGGWLAPFGMLTVAVLVLLAGAWQACKPRMLEDTWH

Sequences:

>Translated_388_residues
MLAAIVMSASVLRVAVTAFSPLAERIGAEIGYSTAVVGVFGMIPTAMFAVSGLLTPALVRRVGLERTALIAMLLAGAGML
VRALMSSTAGLLVFSAVALGGMGIGNVVIPPLVKRYFPDRLAVLSSLYITMVQIGTVVPALIAVPVADSHGWRISIGLWA
LLGFAAALPWLGVLRGRKGHDVADTTALPAGGPAPGRVWRSPVAWGMAGMFGMTSLTTYAVFAWLPRVLADAGAGDAFGG
TMVALFALVGLVAALSAPTVVARLANPFPVVVGCAALFLIAFTGLLVAPMGAPVLWVVILGLGPSTFPMALTLINMRTKT
PQGSAALSGFTQGVGYAVACVGPLLFGMLHTATGGWLAPFGMLTVAVLVLLAGAWQACKPRMLEDTWH
>Mature_388_residues
MLAAIVMSASVLRVAVTAFSPLAERIGAEIGYSTAVVGVFGMIPTAMFAVSGLLTPALVRRVGLERTALIAMLLAGAGML
VRALMSSTAGLLVFSAVALGGMGIGNVVIPPLVKRYFPDRLAVLSSLYITMVQIGTVVPALIAVPVADSHGWRISIGLWA
LLGFAAALPWLGVLRGRKGHDVADTTALPAGGPAPGRVWRSPVAWGMAGMFGMTSLTTYAVFAWLPRVLADAGAGDAFGG
TMVALFALVGLVAALSAPTVVARLANPFPVVVGCAALFLIAFTGLLVAPMGAPVLWVVILGLGPSTFPMALTLINMRTKT
PQGSAALSGFTQGVGYAVACVGPLLFGMLHTATGGWLAPFGMLTVAVLVLLAGAWQACKPRMLEDTWH

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=388, Percent_Identity=31.4432989690722, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1786536, Length=377, Percent_Identity=26.790450928382, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39816; Mature: 39816

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCHHHCCCCCHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]