Click here to switch to the map view.

The map label for this gene is 54026492

Identifier: 54026492

GI number: 54026492

Start: 4687609

End: 4688400

Strand: Reverse

Name: 54026492

Synonym: nfa45190

Alternate gene names: NA

Gene position: 4688400-4687609 (Counterclockwise)

Preceding gene: 54026496

Following gene: 54026489

Centisome position: 77.86

GC content: 66.16

Gene sequence:

>792_bases
ATGGACTGGTACACCGGCAACACCGGCTACGACACCGTGCTCACGATCGGCTTCGCGTTCGCCGCGTTCGTGATCGTCGG
CGGGCTGTTCGCGCAGAGCCCGTACGGTCGATTCGCGCCGGCCTCGCTCGGCTTCAATCTCTCCCCGAAGTTGGGCTGGT
GGCTGATGGAGCTGCCCGCCACCGTCGTGTTCGCGGTGTTCTTTCTGACCGGTCCCGACCGATTCGAGCCCGTACCGCTC
GTCCTCGCCGGAATCTGGTTGCTGCACTACGCCAATCGGGGCTGGTTCTTCCCGCTGGCGATTCGTCAGGTGCCGGACAA
GCGCAGCACCTTCAACGTCTCGGTGCTGGCCGCGGGCATGTTCGTCACCACCCTGCACGGCTACCTCAACGGCGCCTTCT
TCAGCCACGACTACAAGCACCAGTACGGCACCGAGTGGTTGACCGATCCGCGCTTCCTGATCGGGCTCGCCGGCTACCTG
TGCGGCTTCGCCCTGCTCGTGCGCTCCGAGTCGATCGTGCGCAACCTGCGCGACAAGCGCGACCCCGGCGCCGCCGAGTA
CCGGATCCCCTACGGCGGCGGGTTCCGGTTCGTCAGCAGCCCCGCCTATCTGGGTGAACTCATCGCCTGGGCCGGTTTCG
CCCTGCTGACATGGTCGCTGGCGGGTGTGGTCATCTTCCTGATCACCGCGGGCAACCTCGTCCCCCGCGCGTTCGCGACC
CACCGCTGGTACCGGGAGAAGTTCGCCGACTATCCCCGGAACCGGAAAGCCCTGATCCCCTTCGTGATCTGA

Upstream 100 bases:

>100_bases
CGGCATGGGGCTCCTCGGTGGTCGTCATCGCTCGCGGGGCTGTGGCCCGGCACCGCCCATGGTAGAACATGTTCTAATTT
CAGTGCGACGAAGGACCACG

Downstream 100 bases:

>100_bases
CGACGCCGCTCGCCGGGTGGTCGGCGCCGCGGTGACGTGCCGTGCTCGTCACCGCGGCGACCGCACCGACCCGGGCCGGC
CCCTCAGTTCCCCGCGGACT

Product: putative steroid dehydrogenase

Products: NA

Alternate protein names: 3-Oxo-5-Alpha-Steroid 4-Dehydrogenase; 3-Oxo-5-Alpha-Steroid 4-Dehydrogenase Family Protein; Membrane Dehydrogenase Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MDWYTGNTGYDTVLTIGFAFAAFVIVGGLFAQSPYGRFAPASLGFNLSPKLGWWLMELPATVVFAVFFLTGPDRFEPVPL
VLAGIWLLHYANRGWFFPLAIRQVPDKRSTFNVSVLAAGMFVTTLHGYLNGAFFSHDYKHQYGTEWLTDPRFLIGLAGYL
CGFALLVRSESIVRNLRDKRDPGAAEYRIPYGGGFRFVSSPAYLGELIAWAGFALLTWSLAGVVIFLITAGNLVPRAFAT
HRWYREKFADYPRNRKALIPFVI

Sequences:

>Translated_263_residues
MDWYTGNTGYDTVLTIGFAFAAFVIVGGLFAQSPYGRFAPASLGFNLSPKLGWWLMELPATVVFAVFFLTGPDRFEPVPL
VLAGIWLLHYANRGWFFPLAIRQVPDKRSTFNVSVLAAGMFVTTLHGYLNGAFFSHDYKHQYGTEWLTDPRFLIGLAGYL
CGFALLVRSESIVRNLRDKRDPGAAEYRIPYGGGFRFVSSPAYLGELIAWAGFALLTWSLAGVVIFLITAGNLVPRAFAT
HRWYREKFADYPRNRKALIPFVI
>Mature_263_residues
MDWYTGNTGYDTVLTIGFAFAAFVIVGGLFAQSPYGRFAPASLGFNLSPKLGWWLMELPATVVFAVFFLTGPDRFEPVPL
VLAGIWLLHYANRGWFFPLAIRQVPDKRSTFNVSVLAAGMFVTTLHGYLNGAFFSHDYKHQYGTEWLTDPRFLIGLAGYL
CGFALLVRSESIVRNLRDKRDPGAAEYRIPYGGGFRFVSSPAYLGELIAWAGFALLTWSLAGVVIFLITAGNLVPRAFAT
HRWYREKFADYPRNRKALIPFVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507201, Length=233, Percent_Identity=34.7639484978541, Blast_Score=131, Evalue=6e-31,
Organism=Homo sapiens, GI39812447, Length=218, Percent_Identity=37.1559633027523, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI13375785, Length=131, Percent_Identity=34.3511450381679, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17567677, Length=258, Percent_Identity=32.5581395348837, Blast_Score=121, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17567167, Length=247, Percent_Identity=32.7935222672065, Blast_Score=120, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17544706, Length=228, Percent_Identity=27.6315789473684, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17531783, Length=121, Percent_Identity=33.0578512396694, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24657023, Length=94, Percent_Identity=38.2978723404255, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20129365, Length=198, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29488; Mature: 29488

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50244 S5A_REDUCTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA