Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026476

Identifier: 54026476

GI number: 54026476

Start: 4668333

End: 4668602

Strand: Reverse

Name: 54026476

Synonym: nfa45030

Alternate gene names: NA

Gene position: 4668602-4668333 (Counterclockwise)

Preceding gene: 54026477

Following gene: 54026467

Centisome position: 77.54

GC content: 68.52

Gene sequence:

>270_bases
ATGCTGTTCGACATCCGCACCATCGTGGCCGCGCTGCTCGGCAGTTACGGGATCATCCTGGTGATCACCGGGCTGGTCCA
CGACACCGCCGCCGAGGAGGCCAAGACCGGCGGCATCAACGTCAATCTGTGGGCCGGTCTGGGCATGGCGACGTTCGCGC
TGCTGTTCCTGGCCTGGGTGCTGCTGCGCCCGGTCGCGCCGACCAGCACGGAAGCCACCGTGGCGCGGCGCGATTCGACG
CCTGGGTCCGACGATTCGACACCGGCCTGA

Upstream 100 bases:

>100_bases
GGCGGCCACGCTGCCCTGGTATCAGCGCCCCGTGCTGCTCGCGGGCATCGCCCTGGTGCTGGTCATTCTGCTCAACATCT
TCGTGGGATAGGGAGATCCG

Downstream 100 bases:

>100_bases
GGGCGGGCCACACACGACGACGCCGCGGCGGGTGCCGCGGCGTCGTCGTGTGCAGACCGGGAACTCACCGCTGATCCGGG
CGCGGGATGTCACCGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MLFDIRTIVAALLGSYGIILVITGLVHDTAAEEAKTGGINVNLWAGLGMATFALLFLAWVLLRPVAPTSTEATVARRDST
PGSDDSTPA

Sequences:

>Translated_89_residues
MLFDIRTIVAALLGSYGIILVITGLVHDTAAEEAKTGGINVNLWAGLGMATFALLFLAWVLLRPVAPTSTEATVARRDST
PGSDDSTPA
>Mature_89_residues
MLFDIRTIVAALLGSYGIILVITGLVHDTAAEEAKTGGINVNLWAGLGMATFALLFLAWVLLRPVAPTSTEATVARRDST
PGSDDSTPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9285; Mature: 9285

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFDIRTIVAALLGSYGIILVITGLVHDTAAEEAKTGGINVNLWAGLGMATFALLFLAWV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHH
LLRPVAPTSTEATVARRDSTPGSDDSTPA
HHCCCCCCCCCCHHEECCCCCCCCCCCCC
>Mature Secondary Structure
MLFDIRTIVAALLGSYGIILVITGLVHDTAAEEAKTGGINVNLWAGLGMATFALLFLAWV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHH
LLRPVAPTSTEATVARRDSTPGSDDSTPA
HHCCCCCCCCCCHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA