Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026467

Identifier: 54026467

GI number: 54026467

Start: 4658136

End: 4659077

Strand: Reverse

Name: 54026467

Synonym: nfa44940

Alternate gene names: NA

Gene position: 4659077-4658136 (Counterclockwise)

Preceding gene: 54026476

Following gene: 54026462

Centisome position: 77.38

GC content: 73.14

Gene sequence:

>942_bases
GTGCGCATCGGCGCCGACCTGCTCGGCGCGGCCGCGACACTGGCGGGCGTCGCGGGCATCGCGCTGCACTTCGGCCGGTG
GTCGGCCCAGCTGCCGGTGCTCGCGGCCTCGGCCGCGCCGTATCTGATGGGGTCGGCGGTGATCGGCGCCGTGGCGTTCC
TGTCCGTGCGGCGCTGGAGCGGTGCGGCGGTGGCCACGGTCGTCCTGATCGCGGGGGTGGCCGTGCAGGCGCCGCTGTAC
TTCTCGGACCCCGGCTCCGCCGACGGCCCCGTGGTGCGGATGATGCAGGCCAACCTGCTGTTCGACGGCACCGACCCGCG
GACATTCGTCGAGCAGGTGCGCGCGCACGACATCGACGTGCTCACCGTCAACGAACTCACCCCGGCCGCCGTGGCGGGAC
TCGCGGCCGCGGGAATCGACGAGCTGCTCCCGCACCGGTACCTCGCCCCCGGCCGAACCGCGAGCGGCACCGGGATCTGG
AGCCGCCACCCGCTGTCCGACACCGTCGAATACGACGGCTACGTGCTGAACCAACTGTCGGCGACGGCGCAGATCCCCGG
CGCGGGCCCGGTCTCGGTCTACGCGATCCACCCCGTGCCGCCGATCTACGACACCGGAGTCTGGGCCGACGAATTGGCCC
GCCTGCGCACGATCGTCGAGAACGCGCCCGCGGACCGCCCCGCCCTGGTCGGCGGCGACTTCAACGCCACCCACGACCAC
CGGCAATTCCGCGACTACCTGACCGGCCGCTTCGCTGACGCCGCCGACCAAGCGGGCGCCGGACACCTGGCCACCTACCC
GACCGACAAATGGTGGCCCGCCGTCGTCGGCATCGACCACATCCTCGTCGCGGGCGGCAGGGCGACGACCGTCGAAGCCC
TCGACCTACCCGGCTCCGACCACCGCGCCCTCGTCGCCGAGATCCGCCTCGACCCACACTGA

Upstream 100 bases:

>100_bases
CGGCCACGCGTCGACATCCCGGAGTCGCGCTGTGCCCGTACGCGGCGGCGCAGGCGGATCGGCACGATGTGCTTGTCTGT
CCGGTGTGATCTCCAGAATT

Downstream 100 bases:

>100_bases
GGCGGAAACGACGAACCGGTGCGAGCCCACCCGACCCGCACCGGTCCGTTGCCGTGCTGACTACTTCAGCCCGGCCTACT
TCAGTTCGGCGCTGGTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Phosphatase; Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase-Like Protein; Transmembrane Protein; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease/CDSuclease/Phosphatase; Extracellular Nuclease

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MRIGADLLGAAATLAGVAGIALHFGRWSAQLPVLAASAAPYLMGSAVIGAVAFLSVRRWSGAAVATVVLIAGVAVQAPLY
FSDPGSADGPVVRMMQANLLFDGTDPRTFVEQVRAHDIDVLTVNELTPAAVAGLAAAGIDELLPHRYLAPGRTASGTGIW
SRHPLSDTVEYDGYVLNQLSATAQIPGAGPVSVYAIHPVPPIYDTGVWADELARLRTIVENAPADRPALVGGDFNATHDH
RQFRDYLTGRFADAADQAGAGHLATYPTDKWWPAVVGIDHILVAGGRATTVEALDLPGSDHRALVAEIRLDPH

Sequences:

>Translated_313_residues
MRIGADLLGAAATLAGVAGIALHFGRWSAQLPVLAASAAPYLMGSAVIGAVAFLSVRRWSGAAVATVVLIAGVAVQAPLY
FSDPGSADGPVVRMMQANLLFDGTDPRTFVEQVRAHDIDVLTVNELTPAAVAGLAAAGIDELLPHRYLAPGRTASGTGIW
SRHPLSDTVEYDGYVLNQLSATAQIPGAGPVSVYAIHPVPPIYDTGVWADELARLRTIVENAPADRPALVGGDFNATHDH
RQFRDYLTGRFADAADQAGAGHLATYPTDKWWPAVVGIDHILVAGGRATTVEALDLPGSDHRALVAEIRLDPH
>Mature_313_residues
MRIGADLLGAAATLAGVAGIALHFGRWSAQLPVLAASAAPYLMGSAVIGAVAFLSVRRWSGAAVATVVLIAGVAVQAPLY
FSDPGSADGPVVRMMQANLLFDGTDPRTFVEQVRAHDIDVLTVNELTPAAVAGLAAAGIDELLPHRYLAPGRTASGTGIW
SRHPLSDTVEYDGYVLNQLSATAQIPGAGPVSVYAIHPVPPIYDTGVWADELARLRTIVENAPADRPALVGGDFNATHDH
RQFRDYLTGRFADAADQAGAGHLATYPTDKWWPAVVGIDHILVAGGRATTVEALDLPGSDHRALVAEIRLDPH

Specific function: Unknown

COG id: COG3021

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32793; Mature: 32793

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGADLLGAAATLAGVAGIALHFGRWSAQLPVLAASAAPYLMGSAVIGAVAFLSVRRWS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
GAAVATVVLIAGVAVQAPLYFSDPGSADGPVVRMMQANLLFDGTDPRTFVEQVRAHDIDV
CHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCEE
LTVNELTPAAVAGLAAAGIDELLPHRYLAPGRTASGTGIWSRHPLSDTVEYDGYVLNQLS
EEECCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHH
ATAQIPGAGPVSVYAIHPVPPIYDTGVWADELARLRTIVENAPADRPALVGGDFNATHDH
HHEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHH
RQFRDYLTGRFADAADQAGAGHLATYPTDKWWPAVVGIDHILVAGGRATTVEALDLPGSD
HHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCHHHHCCCEEEEECCCCEEEEEEECCCCC
HRALVAEIRLDPH
CCEEEEEEEECCC
>Mature Secondary Structure
MRIGADLLGAAATLAGVAGIALHFGRWSAQLPVLAASAAPYLMGSAVIGAVAFLSVRRWS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
GAAVATVVLIAGVAVQAPLYFSDPGSADGPVVRMMQANLLFDGTDPRTFVEQVRAHDIDV
CHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCCEE
LTVNELTPAAVAGLAAAGIDELLPHRYLAPGRTASGTGIWSRHPLSDTVEYDGYVLNQLS
EEECCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHH
ATAQIPGAGPVSVYAIHPVPPIYDTGVWADELARLRTIVENAPADRPALVGGDFNATHDH
HHEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHH
RQFRDYLTGRFADAADQAGAGHLATYPTDKWWPAVVGIDHILVAGGRATTVEALDLPGSD
HHHHHHHHCCCCCHHHHCCCCCEEECCCCCCCHHHHCCCEEEEECCCCEEEEEEECCCCC
HRALVAEIRLDPH
CCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA