Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026438

Identifier: 54026438

GI number: 54026438

Start: 4631692

End: 4631988

Strand: Reverse

Name: 54026438

Synonym: nfa44650

Alternate gene names: NA

Gene position: 4631988-4631692 (Counterclockwise)

Preceding gene: 54026439

Following gene: 54026435

Centisome position: 76.93

GC content: 67.34

Gene sequence:

>297_bases
GTGAGCACGGTTCTCTCTGCGGCACAAGACTTCTACGGCACGGTTCTGGCCCAGGTCGGCAACCCGACCCCCGAGGCGCC
GCCGATGTCGGACAAGATCCTGCAGATGACCCGCTATTTCACCTGGTTCGTGCTGCTCTCGGGCATCGCGGCCATCACCT
TCGCCGGTGGCCGCTTCGCGTGGGAGAAGTGGAGCGGCGGCGCGTTGCAGTCACCGAAGATGGTGGCGGGCGCGATGCTC
GGCGGTGCGGTCGCCACCAGCGCGGGCACCATCATGAACGCGGTCATGGGCGGCTGA

Upstream 100 bases:

>100_bases
GCGACATCTCGGCACGTTGACATCCCAGCACGTTGACATCCCAGCACGTTCTCGAACACGACGTATTCGGAGCACGCTGA
CATCGAAGAGGGGTACGGCT

Downstream 100 bases:

>100_bases
ACCCGCCCGCGCGATCCGTCAGCCCAGATCGGCCGGGTCGGTGTTGGCCCCGCACAACACGACACAGACGCGTTCGCCCG
GCGCCGGCCGGTAGGCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSTVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFAWEKWSGGALQSPKMVAGAML
GGAVATSAGTIMNAVMGG

Sequences:

>Translated_98_residues
MSTVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFAWEKWSGGALQSPKMVAGAML
GGAVATSAGTIMNAVMGG
>Mature_97_residues
STVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFAWEKWSGGALQSPKMVAGAMLG
GAVATSAGTIMNAVMGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10134; Mature: 10003

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
WEKWSGGALQSPKMVAGAMLGGAVATSAGTIMNAVMGG
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STVLSAAQDFYGTVLAQVGNPTPEAPPMSDKILQMTRYFTWFVLLSGIAAITFAGGRFA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
WEKWSGGALQSPKMVAGAMLGGAVATSAGTIMNAVMGG
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA