Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

Click here to switch to the map view.

The map label for this gene is 54026359

Identifier: 54026359

GI number: 54026359

Start: 4547532

End: 4547834

Strand: Reverse

Name: 54026359

Synonym: nfa43880

Alternate gene names: NA

Gene position: 4547834-4547532 (Counterclockwise)

Preceding gene: 54026360

Following gene: 54026355

Centisome position: 75.53

GC content: 70.63

Gene sequence:

>303_bases
TTGACGGAAACGGGGAATTCGGACACCGAGGCCCGTGGCGGAACTATCCTGTCGCCACCGAACCCGAGTCGGGGCGAGAG
ACCGCCGGGCGGGGCGGTCGGCGAGGAGGTCGCGATGCGCATTTCGGGACGCGCGGTGTGGCAGCAGCTGGTGCGCGGTT
TCCTGTTGTACGGGGCGGGGGTCGGTGGATCGTTGCCGTGCTACGAGGAATGGCTGCGGCGCTCCGCGGAGGCCGAAGCC
GCGGCGGCGCACTGGGATTGGTCCATCCCGCACCGCTGGTACGACGTGGCCCACGGCCGCTGA

Upstream 100 bases:

>100_bases
GGTCTACGGCGGGATCCTCGGCCTCGTGCTGGCCGGCTCCGCCCTGGCACTGCAGGCCGCGACCGGCTGGCTGTGACCGC
CACCGGCAATCGGGCATCTT

Downstream 100 bases:

>100_bases
CGCGGCAGCTCAGCCGCCGCCGTCCGGCGCGGCGGACAATCCGGTGGTGGGCGCGGCCGGGCGAGCCGCCTCGGCGACGC
CGGGGATGCCGTCCTCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTETGNSDTEARGGTILSPPNPSRGERPPGGAVGEEVAMRISGRAVWQQLVRGFLLYGAGVGGSLPCYEEWLRRSAEAEA
AAAHWDWSIPHRWYDVAHGR

Sequences:

>Translated_100_residues
MTETGNSDTEARGGTILSPPNPSRGERPPGGAVGEEVAMRISGRAVWQQLVRGFLLYGAGVGGSLPCYEEWLRRSAEAEA
AAAHWDWSIPHRWYDVAHGR
>Mature_99_residues
TETGNSDTEARGGTILSPPNPSRGERPPGGAVGEEVAMRISGRAVWQQLVRGFLLYGAGVGGSLPCYEEWLRRSAEAEAA
AAHWDWSIPHRWYDVAHGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10875; Mature: 10744

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETGNSDTEARGGTILSPPNPSRGERPPGGAVGEEVAMRISGRAVWQQLVRGFLLYGAG
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
VGGSLPCYEEWLRRSAEAEAAAAHWDWSIPHRWYDVAHGR
CCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
TETGNSDTEARGGTILSPPNPSRGERPPGGAVGEEVAMRISGRAVWQQLVRGFLLYGAG
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
VGGSLPCYEEWLRRSAEAEAAAAHWDWSIPHRWYDVAHGR
CCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA