Click here to switch to the map view.

The map label for this gene is yhaP [H]

Identifier: 54026333

GI number: 54026333

Start: 4523998

End: 4525191

Strand: Reverse

Name: yhaP [H]

Synonym: nfa43620

Alternate gene names: 54026333

Gene position: 4525191-4523998 (Counterclockwise)

Preceding gene: 54026334

Following gene: 54026332

Centisome position: 75.15

GC content: 73.53

Gene sequence:

>1194_bases
ATGACCGGGCCGGACACGTCCTACCCGCGCGCCATCGGGCTGGTGGTGCGGCGGGAATTCCTCGCCCAGGTGCGCACCAA
GGCGTATCGCTGGAGCGTGCTGCTGATGAGCGCGGCCGTCGTGCTGGCGTCGGTGATCTTCGGCATGGTCGACGACGACG
GACCCGCCACCGCCGATGTCGCCGTCGTCGGCCCCGGCACCACGGCCGTGGCCGAACAGCTGCCCGTGGCCGCGCGCGCC
GCCGGACTCGACGTCCGCGTCCAGACCGGCCGCGACCCGCAGGGCGCTCGCGCGGCCGTCGAGGCGGGCATTGTGGACGC
GGCACTGCTGCGCACCGGCGACGGACCCGACGAGGTGCTGGTCCGCGAATCGCTCGACCCGCAGCTGGGTGCCGCCCTCA
CCGAGGTGGTGCGCACCGAGGCGCTGACCCGCGCGGTGGGCACCGACAGCGCGGCCGTGCTCGGCGCGCTGGGCGAGTCG
GCGTTCACGGTGCGCGCGCTCGACCCGCCCGACCCGCAGCAGGGGGAGCGCGTGCGGATGGCGTGGGTGTCCTTGTTGTT
GCTGCTGACCACCGTGCTCGGGTTCGGTGTGTACGTCGCGATCGGGGTGGTGGAGGAGAAGTCGACGCGGGTGGTCGAAC
TGCTGCTGGCCACCATCCGGCCGTCGCAGTTGTTGTGGGGCAAGGTGATCGGCATCGGTGCGTCCGCGCTGTTGCAGGTG
CTGGTGATCGGCGCGGTCGCGCTCGTGGCGGGGCGGGCGACCGGGCTGATCACCCTCACCGACACGGCCGTCGCCGTGTT
CGCCGCGACCCTGATCTGGTCGGTGCTCGGCTACCTGCTGTTCTCGCTGCTGTACGCGGCGGCGGGTTCCCTGGTGTCGC
GGCAGGAGGAGGTGCAGGGCGTCACCGCTCCGTTGATGTTGCTGGCGATGCTGGCCTACGGGCTGAGCATCGGCGCGATC
GGCGACCCCGGCGGCACCTTCGCCCGCGTCGCCGGGTGGATCCCGCCGTTCTCGGCGTTCGTCATGCCGATCCGGACGGC
CGCGGGCGCCGCGACGGGGTGGGAGATCGCCGGCGCCGCGGTGGCGATGCTCCTGGCCTGTGCGCTGGTGTCCCGGATCG
CCGCCCGCGTCTACACCCGCAGCGTCCTGCACACCGGCTCCCGCCTGTCGTGGCGGGCGGCCCTGCGCGGCTGA

Upstream 100 bases:

>100_bases
ACCAGGCGGTGCTGGCCGCCGCGCTGCGCACCGGCCCGGTGCGCCGGTTCGCCTCCTACCGCCCGTCCCTGACCGAGCTC
TACCGAGAGGTGGTCGCGGC

Downstream 100 bases:

>100_bases
GGTCGAGGCGGCGGCGGGGTGGGCGCACCGGTGCCGAGGCCGGGCGACGTTTAGCCGTCCGCCCGTGCGGCATGCCTTCC
GGTGAGAAGTTCCGCCGATG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTGPDTSYPRAIGLVVRREFLAQVRTKAYRWSVLLMSAAVVLASVIFGMVDDDGPATADVAVVGPGTTAVAEQLPVAARA
AGLDVRVQTGRDPQGARAAVEAGIVDAALLRTGDGPDEVLVRESLDPQLGAALTEVVRTEALTRAVGTDSAAVLGALGES
AFTVRALDPPDPQQGERVRMAWVSLLLLLTTVLGFGVYVAIGVVEEKSTRVVELLLATIRPSQLLWGKVIGIGASALLQV
LVIGAVALVAGRATGLITLTDTAVAVFAATLIWSVLGYLLFSLLYAAAGSLVSRQEEVQGVTAPLMLLAMLAYGLSIGAI
GDPGGTFARVAGWIPPFSAFVMPIRTAAGAATGWEIAGAAVAMLLACALVSRIAARVYTRSVLHTGSRLSWRAALRG

Sequences:

>Translated_397_residues
MTGPDTSYPRAIGLVVRREFLAQVRTKAYRWSVLLMSAAVVLASVIFGMVDDDGPATADVAVVGPGTTAVAEQLPVAARA
AGLDVRVQTGRDPQGARAAVEAGIVDAALLRTGDGPDEVLVRESLDPQLGAALTEVVRTEALTRAVGTDSAAVLGALGES
AFTVRALDPPDPQQGERVRMAWVSLLLLLTTVLGFGVYVAIGVVEEKSTRVVELLLATIRPSQLLWGKVIGIGASALLQV
LVIGAVALVAGRATGLITLTDTAVAVFAATLIWSVLGYLLFSLLYAAAGSLVSRQEEVQGVTAPLMLLAMLAYGLSIGAI
GDPGGTFARVAGWIPPFSAFVMPIRTAAGAATGWEIAGAAVAMLLACALVSRIAARVYTRSVLHTGSRLSWRAALRG
>Mature_396_residues
TGPDTSYPRAIGLVVRREFLAQVRTKAYRWSVLLMSAAVVLASVIFGMVDDDGPATADVAVVGPGTTAVAEQLPVAARAA
GLDVRVQTGRDPQGARAAVEAGIVDAALLRTGDGPDEVLVRESLDPQLGAALTEVVRTEALTRAVGTDSAAVLGALGESA
FTVRALDPPDPQQGERVRMAWVSLLLLLTTVLGFGVYVAIGVVEEKSTRVVELLLATIRPSQLLWGKVIGIGASALLQVL
VIGAVALVAGRATGLITLTDTAVAVFAATLIWSVLGYLLFSLLYAAAGSLVSRQEEVQGVTAPLMLLAMLAYGLSIGAIG
DPGGTFARVAGWIPPFSAFVMPIRTAAGAATGWEIAGAAVAMLLACALVSRIAARVYTRSVLHTGSRLSWRAALRG

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41030; Mature: 40899

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPDTSYPRAIGLVVRREFLAQVRTKAYRWSVLLMSAAVVLASVIFGMVDDDGPATADV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
AVVGPGTTAVAEQLPVAARAAGLDVRVQTGRDPQGARAAVEAGIVDAALLRTGDGPDEVL
EEECCCHHHHHHHCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
VRESLDPQLGAALTEVVRTEALTRAVGTDSAAVLGALGESAFTVRALDPPDPQQGERVRM
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
AWVSLLLLLTTVLGFGVYVAIGVVEEKSTRVVELLLATIRPSQLLWGKVIGIGASALLQV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
LVIGAVALVAGRATGLITLTDTAVAVFAATLIWSVLGYLLFSLLYAAAGSLVSRQEEVQG
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VTAPLMLLAMLAYGLSIGAIGDPGGTFARVAGWIPPFSAFVMPIRTAAGAATGWEIAGAA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
VAMLLACALVSRIAARVYTRSVLHTGSRLSWRAALRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
TGPDTSYPRAIGLVVRREFLAQVRTKAYRWSVLLMSAAVVLASVIFGMVDDDGPATADV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
AVVGPGTTAVAEQLPVAARAAGLDVRVQTGRDPQGARAAVEAGIVDAALLRTGDGPDEVL
EEECCCHHHHHHHCCHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
VRESLDPQLGAALTEVVRTEALTRAVGTDSAAVLGALGESAFTVRALDPPDPQQGERVRM
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
AWVSLLLLLTTVLGFGVYVAIGVVEEKSTRVVELLLATIRPSQLLWGKVIGIGASALLQV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
LVIGAVALVAGRATGLITLTDTAVAVFAATLIWSVLGYLLFSLLYAAAGSLVSRQEEVQG
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VTAPLMLLAMLAYGLSIGAIGDPGGTFARVAGWIPPFSAFVMPIRTAAGAATGWEIAGAA
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH
VAMLLACALVSRIAARVYTRSVLHTGSRLSWRAALRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]