| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is yieF [H]
Identifier: 54026281
GI number: 54026281
Start: 4469018
End: 4469587
Strand: Reverse
Name: yieF [H]
Synonym: nfa43100
Alternate gene names: 54026281
Gene position: 4469587-4469018 (Counterclockwise)
Preceding gene: 54026284
Following gene: 54026280
Centisome position: 74.23
GC content: 73.16
Gene sequence:
>570_bases GTGATGAGCCAGACCCGAATCCTCGCCCTCTCCGGCAGCCTGCGCAGCGCCTCCATCACGCGTCAGCTCGCCGAGGCGGC GGCGCAGACCGCGCCCGAGGGCGTCGAGGTCACCGTCTACGACGGCCTCGGTGAGATCCCCTTCTACAACGAGGACATCG ACGTCGAGGGTGCGGTGCCCGCGCCCGCCCAGCGGTTGCGCGACGCGGTGGCCGACGCCGACGGCGTCCTGCTGGTCACT CCCGAGTACAACGGCACCCTGTCGGCCGTGCTGAAGAACGCCATCGACTGGATCTCGCGCCCCTACGGCGCCGGCGCGGT CAAGGGCAAGCCGGTCGCGGTGCTCAGCGCCTCCATCAGCCCCAACGCCGCCCGGTGGGCCCACGGCGACGCGGTGAAGG CCGTCGGCATCGCCGGTGGCACCGTCGTCGAGGCCGCGCACGCCCACTTCGGCACCATCGGCGAGCGGTTCGGCGCCGCC CATCCGCGCGAGGACGCCGAGGCGCTCACCGAACTCGGCGCCAGCGTGCACGAGCTGGTCGAGGCCGCGCGCAAGCTCGT CTCCGCCTGA
Upstream 100 bases:
>100_bases TGTGCACCCCTCCCGGGAATGTAATCGGACCGTGGTCCGGTTGAGTCGGTTGAGTCAGACGACCGCAACGGAAACCACCA CCATCAGTACACCAGGAGTT
Downstream 100 bases:
>100_bases TCCGATCGCCTGATCCGACCCGCCGGATCCACCACGCGCGACACGCAGGGGCCGCTCCCGTCCGGGAGCGGCCCCTGCCG CTGTTTCGCCGGTTTACCGG
Product: putative reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVPAPAQRLRDAVADADGVLLVT PEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASISPNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAA HPREDAEALTELGASVHELVEAARKLVSA
Sequences:
>Translated_189_residues MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVPAPAQRLRDAVADADGVLLVT PEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASISPNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAA HPREDAEALTELGASVHELVEAARKLVSA >Mature_189_residues MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVPAPAQRLRDAVADADGVLLVT PEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASISPNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAA HPREDAEALTELGASVHELVEAARKLVSA
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=119, Percent_Identity=36.9747899159664, Blast_Score=84, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19462; Mature: 19462
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVP CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC APAQRLRDAVADADGVLLVTPEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASIS CHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC PNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAAHPREDAEALTELGASVHELV CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EAARKLVSA HHHHHHHCC >Mature Secondary Structure MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVP CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC APAQRLRDAVADADGVLLVTPEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASIS CHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC PNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAAHPREDAEALTELGASVHELV CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH EAARKLVSA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]