Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is yieF [H]

Identifier: 54026281

GI number: 54026281

Start: 4469018

End: 4469587

Strand: Reverse

Name: yieF [H]

Synonym: nfa43100

Alternate gene names: 54026281

Gene position: 4469587-4469018 (Counterclockwise)

Preceding gene: 54026284

Following gene: 54026280

Centisome position: 74.23

GC content: 73.16

Gene sequence:

>570_bases
GTGATGAGCCAGACCCGAATCCTCGCCCTCTCCGGCAGCCTGCGCAGCGCCTCCATCACGCGTCAGCTCGCCGAGGCGGC
GGCGCAGACCGCGCCCGAGGGCGTCGAGGTCACCGTCTACGACGGCCTCGGTGAGATCCCCTTCTACAACGAGGACATCG
ACGTCGAGGGTGCGGTGCCCGCGCCCGCCCAGCGGTTGCGCGACGCGGTGGCCGACGCCGACGGCGTCCTGCTGGTCACT
CCCGAGTACAACGGCACCCTGTCGGCCGTGCTGAAGAACGCCATCGACTGGATCTCGCGCCCCTACGGCGCCGGCGCGGT
CAAGGGCAAGCCGGTCGCGGTGCTCAGCGCCTCCATCAGCCCCAACGCCGCCCGGTGGGCCCACGGCGACGCGGTGAAGG
CCGTCGGCATCGCCGGTGGCACCGTCGTCGAGGCCGCGCACGCCCACTTCGGCACCATCGGCGAGCGGTTCGGCGCCGCC
CATCCGCGCGAGGACGCCGAGGCGCTCACCGAACTCGGCGCCAGCGTGCACGAGCTGGTCGAGGCCGCGCGCAAGCTCGT
CTCCGCCTGA

Upstream 100 bases:

>100_bases
TGTGCACCCCTCCCGGGAATGTAATCGGACCGTGGTCCGGTTGAGTCGGTTGAGTCAGACGACCGCAACGGAAACCACCA
CCATCAGTACACCAGGAGTT

Downstream 100 bases:

>100_bases
TCCGATCGCCTGATCCGACCCGCCGGATCCACCACGCGCGACACGCAGGGGCCGCTCCCGTCCGGGAGCGGCCCCTGCCG
CTGTTTCGCCGGTTTACCGG

Product: putative reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVPAPAQRLRDAVADADGVLLVT
PEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASISPNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAA
HPREDAEALTELGASVHELVEAARKLVSA

Sequences:

>Translated_189_residues
MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVPAPAQRLRDAVADADGVLLVT
PEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASISPNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAA
HPREDAEALTELGASVHELVEAARKLVSA
>Mature_189_residues
MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVPAPAQRLRDAVADADGVLLVT
PEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASISPNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAA
HPREDAEALTELGASVHELVEAARKLVSA

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family [H]

Homologues:

Organism=Escherichia coli, GI1790149, Length=119, Percent_Identity=36.9747899159664, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 19462; Mature: 19462

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVP
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
APAQRLRDAVADADGVLLVTPEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASIS
CHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
PNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAAHPREDAEALTELGASVHELV
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EAARKLVSA
HHHHHHHCC
>Mature Secondary Structure
MMSQTRILALSGSLRSASITRQLAEAAAQTAPEGVEVTVYDGLGEIPFYNEDIDVEGAVP
CCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
APAQRLRDAVADADGVLLVTPEYNGTLSAVLKNAIDWISRPYGAGAVKGKPVAVLSASIS
CHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
PNAARWAHGDAVKAVGIAGGTVVEAAHAHFGTIGERFGAAHPREDAEALTELGASVHELV
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
EAARKLVSA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]