Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54026272

Identifier: 54026272

GI number: 54026272

Start: 4457362

End: 4458726

Strand: Reverse

Name: 54026272

Synonym: nfa43010

Alternate gene names: NA

Gene position: 4458726-4457362 (Counterclockwise)

Preceding gene: 54026278

Following gene: 54026270

Centisome position: 74.05

GC content: 69.52

Gene sequence:

>1365_bases
ATGTCGCAGATCGATCTCATCGAAGCACGCCCGGTTCCGGCCGAATCGCTGCCGGAATTCGTCGCCGACCACCGCGTCGA
CGCCGCGCTGGACTGGCTGGACAACCATCCGCCGCACCTGATCGCCGACCAACTCGCCCGCATGGACGCCGTCCAGGCAG
GCGTGGCGTTCCGGCTGCTGGACAAGGATCAGGCGCTGGCGGTGTTCGAGGAACTCGAACCGGTCGACCAGCAGCAGATC
CTGCAGGGCTTGCGGGATCAGAGTTTCCGCGAGCTGGTGGAAGGGATGGCGCCCGACGACCGCGCCCGCATGCTGCGCGA
GGCGCCGGCCAAGGTCGCCAAGAAGGTGCTGGCCGGGCTCAGCCCGCGGGAACGGCGGATGACGGCGAGTTTGCTGGGGT
ACCCGGAAGGTTCGGCCGGGCAGTACATGACTCCCGAGGTGGTCGCGCTGCCCAGCGATCTCACCGTCGCCGAGGCGCTG
GCGACCGTGCGGGCCAAGGGCGCGCACGCCGAGACCGTGTACACGCTGCCGGTGGTCGACTCGGGCCGGCGGCTGACCGG
CATCGTCGAGCTGCGGGAACTCGTGCTGGCCCGGCCGGAGACGATGGTGTCCGAACTCGTCGTCACCGAACCGGCGTTCG
CGCGCGCCACCGACTCCGCCGAGAAGGCGGCGCGGTTGATGCGCGAGACCAACGACATCAACCTGCCGGTGGTGGACAGC
GAGAACCGCCTGGTCGGCCTGCTCACCATCGACGACGCGGTCGAGGTGATCGAGGCCGCCGACAGCGAAGACGTTGCGCG
GCAAGCGGGTTCGGCGCCGTGGGAGGGCCATTACATGGCCGCCGGGGTGTTCCAGCTGGCCCGTTATCGTGCGCTGTGGT
TGATGCTGCTGCTGTTCGCGGCGACGTTGACGGTGAGCGTCACCGACTTCTTCCAGGCGACCCTGGAACAGGCCGCCCAC
CTGGCGTTGTTCATCCCGCTGCTGATCGGCGCGGGCGGCAACGCGGGCGCGCAGGCGGCGACCGCCTGTGTGCGCGCGCT
GGCGGTGGGCGAGGTCCGGGTGTCGGATCTGTTCAAGGTGATCTGGCGGGAGTGCCGGGTCGGGTTGGTGCTGGGGTCAC
TGCTGGCCTCGGCAGGCCTGGCGATCGCGGCCCTGTTCGTCGGCCCGCGCATCGCCGTGGTCGTCGCGATCACGCTGGTG
CTGATCTGCGGCTGGGCGGCCACCATCGGCGGCACCATGCCGCTGCTGGCCAAGAAGCTCCGCATCGACCCCGCCGTCGT
CTCGGCCCCGATGGTGACCACCCTGGTCGACGCGACCGGCCTGGTCATCTACTTCACCACCGCCAAACTGGTATTGGGGA
TCTGA

Upstream 100 bases:

>100_bases
ACCCACGGTGAGCGGTGCCCCTGTGCTCGCGCGGGGCGCCCGCCGTGGTCACGCTCCGCTGCCGCCTTCGGGCGCCGACC
ACTCGAGCTGAGGACTCCCC

Downstream 100 bases:

>100_bases
GGTCGGGGCAACAGCGAAAGCGCCGTAGCCGCTGCCGGGTCAGGCCGGGGGACGCGGTCCCTCGCCGGGTGGGACCGGGG
TGGTGTTGTCGCGGCAGGGT

Product: putative divalent cation transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSQIDLIEARPVPAESLPEFVADHRVDAALDWLDNHPPHLIADQLARMDAVQAGVAFRLLDKDQALAVFEELEPVDQQQI
LQGLRDQSFRELVEGMAPDDRARMLREAPAKVAKKVLAGLSPRERRMTASLLGYPEGSAGQYMTPEVVALPSDLTVAEAL
ATVRAKGAHAETVYTLPVVDSGRRLTGIVELRELVLARPETMVSELVVTEPAFARATDSAEKAARLMRETNDINLPVVDS
ENRLVGLLTIDDAVEVIEAADSEDVARQAGSAPWEGHYMAAGVFQLARYRALWLMLLLFAATLTVSVTDFFQATLEQAAH
LALFIPLLIGAGGNAGAQAATACVRALAVGEVRVSDLFKVIWRECRVGLVLGSLLASAGLAIAALFVGPRIAVVVAITLV
LICGWAATIGGTMPLLAKKLRIDPAVVSAPMVTTLVDATGLVIYFTTAKLVLGI

Sequences:

>Translated_454_residues
MSQIDLIEARPVPAESLPEFVADHRVDAALDWLDNHPPHLIADQLARMDAVQAGVAFRLLDKDQALAVFEELEPVDQQQI
LQGLRDQSFRELVEGMAPDDRARMLREAPAKVAKKVLAGLSPRERRMTASLLGYPEGSAGQYMTPEVVALPSDLTVAEAL
ATVRAKGAHAETVYTLPVVDSGRRLTGIVELRELVLARPETMVSELVVTEPAFARATDSAEKAARLMRETNDINLPVVDS
ENRLVGLLTIDDAVEVIEAADSEDVARQAGSAPWEGHYMAAGVFQLARYRALWLMLLLFAATLTVSVTDFFQATLEQAAH
LALFIPLLIGAGGNAGAQAATACVRALAVGEVRVSDLFKVIWRECRVGLVLGSLLASAGLAIAALFVGPRIAVVVAITLV
LICGWAATIGGTMPLLAKKLRIDPAVVSAPMVTTLVDATGLVIYFTTAKLVLGI
>Mature_453_residues
SQIDLIEARPVPAESLPEFVADHRVDAALDWLDNHPPHLIADQLARMDAVQAGVAFRLLDKDQALAVFEELEPVDQQQIL
QGLRDQSFRELVEGMAPDDRARMLREAPAKVAKKVLAGLSPRERRMTASLLGYPEGSAGQYMTPEVVALPSDLTVAEALA
TVRAKGAHAETVYTLPVVDSGRRLTGIVELRELVLARPETMVSELVVTEPAFARATDSAEKAARLMRETNDINLPVVDSE
NRLVGLLTIDDAVEVIEAADSEDVARQAGSAPWEGHYMAAGVFQLARYRALWLMLLLFAATLTVSVTDFFQATLEQAAHL
ALFIPLLIGAGGNAGAQAATACVRALAVGEVRVSDLFKVIWRECRVGLVLGSLLASAGLAIAALFVGPRIAVVVAITLVL
ICGWAATIGGTMPLLAKKLRIDPAVVSAPMVTTLVDATGLVIYFTTAKLVLGI

Specific function: Acts as a magnesium transporter [H]

COG id: COG2239

COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR006668
- InterPro:   IPR006667
- InterPro:   IPR006669 [H]

Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]

EC number: NA

Molecular weight: Translated: 48602; Mature: 48471

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIDLIEARPVPAESLPEFVADHRVDAALDWLDNHPPHLIADQLARMDAVQAGVAFRLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHEEEE
DKDQALAVFEELEPVDQQQILQGLRDQSFRELVEGMAPDDRARMLREAPAKVAKKVLAGL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
SPRERRMTASLLGYPEGSAGQYMTPEVVALPSDLTVAEALATVRAKGAHAETVYTLPVVD
CHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC
SGRRLTGIVELRELVLARPETMVSELVVTEPAFARATDSAEKAARLMRETNDINLPVVDS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCEEECC
ENRLVGLLTIDDAVEVIEAADSEDVARQAGSAPWEGHYMAAGVFQLARYRALWLMLLLFA
CCCEEEEEEHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATLTVSVTDFFQATLEQAAHLALFIPLLIGAGGNAGAQAATACVRALAVGEVRVSDLFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
IWRECRVGLVLGSLLASAGLAIAALFVGPRIAVVVAITLVLICGWAATIGGTMPLLAKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RIDPAVVSAPMVTTLVDATGLVIYFTTAKLVLGI
CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCC
>Mature Secondary Structure 
SQIDLIEARPVPAESLPEFVADHRVDAALDWLDNHPPHLIADQLARMDAVQAGVAFRLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHEEEE
DKDQALAVFEELEPVDQQQILQGLRDQSFRELVEGMAPDDRARMLREAPAKVAKKVLAGL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
SPRERRMTASLLGYPEGSAGQYMTPEVVALPSDLTVAEALATVRAKGAHAETVYTLPVVD
CHHHHHHHHHHHCCCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC
SGRRLTGIVELRELVLARPETMVSELVVTEPAFARATDSAEKAARLMRETNDINLPVVDS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCEEECC
ENRLVGLLTIDDAVEVIEAADSEDVARQAGSAPWEGHYMAAGVFQLARYRALWLMLLLFA
CCCEEEEEEHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATLTVSVTDFFQATLEQAAHLALFIPLLIGAGGNAGAQAATACVRALAVGEVRVSDLFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
IWRECRVGLVLGSLLASAGLAIAALFVGPRIAVVVAITLVLICGWAATIGGTMPLLAKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RIDPAVVSAPMVTTLVDATGLVIYFTTAKLVLGI
CCCHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA