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The map label for this gene is 54026270

Identifier: 54026270

GI number: 54026270

Start: 4454162

End: 4455334

Strand: Reverse

Name: 54026270

Synonym: nfa42990

Alternate gene names: NA

Gene position: 4455334-4454162 (Counterclockwise)

Preceding gene: 54026272

Following gene: 54026269

Centisome position: 73.99

GC content: 73.49

Gene sequence:

>1173_bases
ATGATCGAACTGCGTCGCCTCGTCGCCGCCGCGGTGGCGGTGGCGGTCCTTCCGCTGGGAGCCGCCACCGCCGCCCCGGT
GACCGCCGCACCGGCCGCGGTGGCCCCGGTGTCCGTGCCCGAACTGCCCATGCCGACCGGCGTTTTCGCGGTCGGCCGCG
ATACCTGGCATGTCGTGGACGACTCCCGCCGGGACCCCTGGGTGCCGAGCGAGCCCCGCGAACTGATGGTCGGCCTGTTC
TATCCCGCACTATCGGGCGACGGCGCCGTGGCGCCGTATGCCACGCCGGCCGAGGCGCGCCTGCTCGTCACCCGCGTCGG
CGCCCGGTCGAGTGACGCGGGGGAAGCGGTGCGCGCCACCGAAACCCACAGCCTCACCGGCGCCACACCGCAACCGGGTT
CGTTCCCGCTCGTCGTGCTCTCCCCGGGCTTCGGGATGCCGCGCTACACCCTGACCTCGCTGGCCGAGGAGCTCGCCTCG
CGCGGATACGTCGTGGCCGCGGTCGATCACGCGAACGAGGCGATGGGCGTCGAATTCCCGGACGGGCGGATGTCGACCTG
CCGCGCCTGCGAAACACTGGAAGACCAGGGCGCTTTCGCCCTCCTCGTGGAGACGCGCGCCCGGGACGTGTCGGTGCTGC
TGGACCGCCTCGCCGCCGCCGACGCGCCATCGGTGGCCCGGTCGGTCGACTTCACCCGCATCGGGATGGCGGGCCATTCG
ATCGGCGGGGCGAGCGCCGCCGCGGCCATGGCGCGCGACGGCCGGGTGCGTGCCGGGGTGAACATGGACGGGGCGTTTCT
CAGCCTGCCGCCCGGCGACGATCCGGCCGGGCGCGCGTTCCTGTTACTCGGCACCGACGACGAGGTGCACCGGCCCGGCG
GTTCGGATCCGACCTGGACGCTGACCTGGCCCGCACTGGGCATGTGGAAGCGCTGGGTGACCTTCGCCGGGGCCGACCAC
TACTCCTTCACCGACATCCCGGTGCTCGCGGAGCAACTGGACGGGAGCGAACTCGGATTGCCGCCCGGCGGCACGCTGTC
CGGGCAGCGTGCCGTGGCGCTCACCCGCGCCTACGTCGGCGCGTTCTTCGATCAGCGGCTGCGCGGGATCCCGCAGCCGC
TGCTGGACGGCCCAACCCCGGGGCGCCCCGAGGCGCGATTCCACATGCTCTGA

Upstream 100 bases:

>100_bases
CATCGTTCTCGGGGATGACGCGCACCCTGAGAATCCGTGGGCGGCGAAGCCGACCGCAGGCCGATTCCGCGGCAGGACGT
GCCCGCCTAGTGTCGGAACG

Downstream 100 bases:

>100_bases
GCAGCCCGCGGCCCGTCTGGATCGCGGTTCGGGCAGGTCGGCGAGCCGCCGAGCAAACCATCGGCGACCGATCCGCGGGG
TCGGCTCGGACCCGGTGCGG

Product: putative hydrolase

Products: NA

Alternate protein names: Hydrolase; Esterase/Lipase; LOW QUALITY PROTEIN Lipase; Carboxylic Ester Hydrolase; LOW QUALITY PROTEIN Lipase; Dienelactone Hydrolase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MIELRRLVAAAVAVAVLPLGAATAAPVTAAPAAVAPVSVPELPMPTGVFAVGRDTWHVVDDSRRDPWVPSEPRELMVGLF
YPALSGDGAVAPYATPAEARLLVTRVGARSSDAGEAVRATETHSLTGATPQPGSFPLVVLSPGFGMPRYTLTSLAEELAS
RGYVVAAVDHANEAMGVEFPDGRMSTCRACETLEDQGAFALLVETRARDVSVLLDRLAAADAPSVARSVDFTRIGMAGHS
IGGASAAAAMARDGRVRAGVNMDGAFLSLPPGDDPAGRAFLLLGTDDEVHRPGGSDPTWTLTWPALGMWKRWVTFAGADH
YSFTDIPVLAEQLDGSELGLPPGGTLSGQRAVALTRAYVGAFFDQRLRGIPQPLLDGPTPGRPEARFHML

Sequences:

>Translated_390_residues
MIELRRLVAAAVAVAVLPLGAATAAPVTAAPAAVAPVSVPELPMPTGVFAVGRDTWHVVDDSRRDPWVPSEPRELMVGLF
YPALSGDGAVAPYATPAEARLLVTRVGARSSDAGEAVRATETHSLTGATPQPGSFPLVVLSPGFGMPRYTLTSLAEELAS
RGYVVAAVDHANEAMGVEFPDGRMSTCRACETLEDQGAFALLVETRARDVSVLLDRLAAADAPSVARSVDFTRIGMAGHS
IGGASAAAAMARDGRVRAGVNMDGAFLSLPPGDDPAGRAFLLLGTDDEVHRPGGSDPTWTLTWPALGMWKRWVTFAGADH
YSFTDIPVLAEQLDGSELGLPPGGTLSGQRAVALTRAYVGAFFDQRLRGIPQPLLDGPTPGRPEARFHML
>Mature_390_residues
MIELRRLVAAAVAVAVLPLGAATAAPVTAAPAAVAPVSVPELPMPTGVFAVGRDTWHVVDDSRRDPWVPSEPRELMVGLF
YPALSGDGAVAPYATPAEARLLVTRVGARSSDAGEAVRATETHSLTGATPQPGSFPLVVLSPGFGMPRYTLTSLAEELAS
RGYVVAAVDHANEAMGVEFPDGRMSTCRACETLEDQGAFALLVETRARDVSVLLDRLAAADAPSVARSVDFTRIGMAGHS
IGGASAAAAMARDGRVRAGVNMDGAFLSLPPGDDPAGRAFLLLGTDDEVHRPGGSDPTWTLTWPALGMWKRWVTFAGADH
YSFTDIPVLAEQLDGSELGLPPGGTLSGQRAVALTRAYVGAFFDQRLRGIPQPLLDGPTPGRPEARFHML

Specific function: Unknown

COG id: COG4188

COG function: function code R; Predicted dienelactone hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40807; Mature: 40807

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELRRLVAAAVAVAVLPLGAATAAPVTAAPAAVAPVSVPELPMPTGVFAVGRDTWHVVD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEC
DSRRDPWVPSEPRELMVGLFYPALSGDGAVAPYATPAEARLLVTRVGARSSDAGEAVRAT
CCCCCCCCCCCHHHHHEEHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCEEEC
ETHSLTGATPQPGSFPLVVLSPGFGMPRYTLTSLAEELASRGYVVAAVDHANEAMGVEFP
CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCC
DGRMSTCRACETLEDQGAFALLVETRARDVSVLLDRLAAADAPSVARSVDFTRIGMAGHS
CCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCC
IGGASAAAAMARDGRVRAGVNMDGAFLSLPPGDDPAGRAFLLLGTDDEVHRPGGSDPTWT
CCCHHHHHHHHCCCCEEECCCCCCCEEECCCCCCCCCCEEEEEECCCHHCCCCCCCCCEE
LTWPALGMWKRWVTFAGADHYSFTDIPVLAEQLDGSELGLPPGGTLSGQRAVALTRAYVG
EECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AFFDQRLRGIPQPLLDGPTPGRPEARFHML
HHHHHHHHCCCCHHHCCCCCCCCCCEEECC
>Mature Secondary Structure
MIELRRLVAAAVAVAVLPLGAATAAPVTAAPAAVAPVSVPELPMPTGVFAVGRDTWHVVD
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEC
DSRRDPWVPSEPRELMVGLFYPALSGDGAVAPYATPAEARLLVTRVGARSSDAGEAVRAT
CCCCCCCCCCCHHHHHEEHHHHCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCEEEC
ETHSLTGATPQPGSFPLVVLSPGFGMPRYTLTSLAEELASRGYVVAAVDHANEAMGVEFP
CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCC
DGRMSTCRACETLEDQGAFALLVETRARDVSVLLDRLAAADAPSVARSVDFTRIGMAGHS
CCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHCCCEEECCCCCC
IGGASAAAAMARDGRVRAGVNMDGAFLSLPPGDDPAGRAFLLLGTDDEVHRPGGSDPTWT
CCCHHHHHHHHCCCCEEECCCCCCCEEECCCCCCCCCCEEEEEECCCHHCCCCCCCCCEE
LTWPALGMWKRWVTFAGADHYSFTDIPVLAEQLDGSELGLPPGGTLSGQRAVALTRAYVG
EECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AFFDQRLRGIPQPLLDGPTPGRPEARFHML
HHHHHHHHCCCCHHHCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA