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The map label for this gene is ylmA [H]

Identifier: 54026262

GI number: 54026262

Start: 4444858

End: 4445691

Strand: Reverse

Name: ylmA [H]

Synonym: nfa42910

Alternate gene names: 54026262

Gene position: 4445691-4444858 (Counterclockwise)

Preceding gene: 54026263

Following gene: 54026261

Centisome position: 73.83

GC content: 71.94

Gene sequence:

>834_bases
ATGGAGCGCGTGCCGCAACCGGATCCCGATCTGCTCATCGACTTCACCGACGTGACCATCCGACGCTCGGGGCACACCCT
CGTCGGTCCGGTCACCTGGCAGGTCGAGCTCGACGAACGCTGGGTCGTGCTCGGACCCAACGGCGCGGGCAAGACCTCCC
TGCTCCGTATCGCCGCCGCCGAGACCCACCCCACCTCGGGCACGGCCAACCTGCTCGGCGAAACCCTCGGCCGGGTGGAC
GTCAGCGAACTGCGCCCGCGCATCGGCCTGTCCTCGGCCGCGCTGGCCGGGCGTGTGCCCCGCGACGAGAAGGTGCTCGA
TCTGGTGGTCTCCGCGGGCTACGCGGTGCTCGGCCGCTGGCGCGAGCGCTACGACGACATGGACACCGACCGGGCCGTGG
ACATGCTGGAAAGCCTCGGCGCCGAACACCTTTCCGACCGCACCTACGGCACCCTGTCCGAGGGCGAGCGCAAACGGGTG
CTGATCGCCCGCGCGCTGATGACCGATCCCGAACTGCTGCTGCTCGACGAACCCGCCGCCGGGCTCGACCTGGGCGGGCG
CGAGGAGCTCGTCGAGCGACTGGGCGACCTGGCCGCCGACCCGGACGCGCCCGCCATCGTGCTGGTGACCCACCACGTGG
AGGAGATCCCGCCCGGGTTCACCCACGCCCTGCTGCTCAACGAGGGCGAGGTGGTGGCCCAGGGCCTGCTCGACGACGTG
TTGACCTCCGAGAACCTCAGCGAGGCATTCCGCCAGGCCATCGCCCTCGACCGGATCGAAGGCCGCTGGTTCGCGCGGCG
GGCGCGCCGGGCGGGCAGGCACCGCTCGCGCTGA

Upstream 100 bases:

>100_bases
CGGATTCACCGAGATCGCGCCCGGTTCGCTGACCGTGATCGGGGTGCCCGCCGACACCTGGTGAGGGCCGGTCCGACACC
GCCGCGGGATCTGAGCCAAG

Downstream 100 bases:

>100_bases
CGCCACAGTGACGCGGGCTATGGTGCTGGGGTGAGTGAGACCAATTCGGCGGGCGCCCCGGCGTCGCAGGCGCCCCAGCC
CAAGGACGCCTCGACGGTGA

Product: putative ABC transporter ATP-binding protein

Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MERVPQPDPDLLIDFTDVTIRRSGHTLVGPVTWQVELDERWVVLGPNGAGKTSLLRIAAAETHPTSGTANLLGETLGRVD
VSELRPRIGLSSAALAGRVPRDEKVLDLVVSAGYAVLGRWRERYDDMDTDRAVDMLESLGAEHLSDRTYGTLSEGERKRV
LIARALMTDPELLLLDEPAAGLDLGGREELVERLGDLAADPDAPAIVLVTHHVEEIPPGFTHALLLNEGEVVAQGLLDDV
LTSENLSEAFRQAIALDRIEGRWFARRARRAGRHRSR

Sequences:

>Translated_277_residues
MERVPQPDPDLLIDFTDVTIRRSGHTLVGPVTWQVELDERWVVLGPNGAGKTSLLRIAAAETHPTSGTANLLGETLGRVD
VSELRPRIGLSSAALAGRVPRDEKVLDLVVSAGYAVLGRWRERYDDMDTDRAVDMLESLGAEHLSDRTYGTLSEGERKRV
LIARALMTDPELLLLDEPAAGLDLGGREELVERLGDLAADPDAPAIVLVTHHVEEIPPGFTHALLLNEGEVVAQGLLDDV
LTSENLSEAFRQAIALDRIEGRWFARRARRAGRHRSR
>Mature_277_residues
MERVPQPDPDLLIDFTDVTIRRSGHTLVGPVTWQVELDERWVVLGPNGAGKTSLLRIAAAETHPTSGTANLLGETLGRVD
VSELRPRIGLSSAALAGRVPRDEKVLDLVVSAGYAVLGRWRERYDDMDTDRAVDMLESLGAEHLSDRTYGTLSEGERKRV
LIARALMTDPELLLLDEPAAGLDLGGREELVERLGDLAADPDAPAIVLVTHHVEEIPPGFTHALLLNEGEVVAQGLLDDV
LTSENLSEAFRQAIALDRIEGRWFARRARRAGRHRSR

Specific function: Part Of The Binding-Protein-Dependent Transport System For Ferric Enterobactin. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG1119

COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI150417984, Length=180, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27881501, Length=201, Percent_Identity=25.8706467661692, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI30795238, Length=201, Percent_Identity=25.8706467661692, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786803, Length=211, Percent_Identity=31.2796208530806, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786975, Length=225, Percent_Identity=28.4444444444444, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787089, Length=249, Percent_Identity=31.3253012048193, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786319, Length=209, Percent_Identity=33.0143540669856, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788761, Length=190, Percent_Identity=34.7368421052632, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788450, Length=229, Percent_Identity=31.0043668122271, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081709, Length=229, Percent_Identity=26.2008733624454, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789864, Length=249, Percent_Identity=26.5060240963855, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=28.1385281385281, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786253, Length=239, Percent_Identity=25.9414225941423, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1786563, Length=200, Percent_Identity=32, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786698, Length=193, Percent_Identity=27.979274611399, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787547, Length=240, Percent_Identity=27.9166666666667, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI87081834, Length=193, Percent_Identity=30.5699481865285, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=27.8969957081545, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789032, Length=229, Percent_Identity=28.3842794759825, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=26.4069264069264, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790739, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787712, Length=199, Percent_Identity=29.6482412060301, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87081782, Length=212, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788897, Length=233, Percent_Identity=27.8969957081545, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=243, Percent_Identity=24.2798353909465, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=28.4444444444444, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790544, Length=224, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787029, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786398, Length=228, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI48994943, Length=249, Percent_Identity=25.7028112449799, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789962, Length=234, Percent_Identity=25.2136752136752, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=26.8722466960352, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786981, Length=206, Percent_Identity=34.4660194174757, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1787112, Length=232, Percent_Identity=27.1551724137931, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1790525, Length=211, Percent_Identity=25.1184834123223, Blast_Score=61, Evalue=1e-10,
Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=24.7899159663866, Blast_Score=61, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71983523, Length=238, Percent_Identity=27.7310924369748, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=238, Percent_Identity=27.7310924369748, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=238, Percent_Identity=27.7310924369748, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=174, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6320266, Length=240, Percent_Identity=27.9166666666667, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320874, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161076682, Length=245, Percent_Identity=27.3469387755102, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI161076684, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581617, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581615, Length=245, Percent_Identity=27.3469387755102, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21357907, Length=244, Percent_Identity=27.0491803278689, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 30405; Mature: 30405

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVPQPDPDLLIDFTDVTIRRSGHTLVGPVTWQVELDERWVVLGPNGAGKTSLLRIAAA
CCCCCCCCCCEEEEEEEEEEEECCCEEECCEEEEEEECCEEEEECCCCCCCHHEEEEEEC
ETHPTSGTANLLGETLGRVDVSELRPRIGLSSAALAGRVPRDEKVLDLVVSAGYAVLGRW
CCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RERYDDMDTDRAVDMLESLGAEHLSDRTYGTLSEGERKRVLIARALMTDPELLLLDEPAA
HHHHCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
GLDLGGREELVERLGDLAADPDAPAIVLVTHHVEEIPPGFTHALLLNEGEVVAQGLLDDV
CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCEEEEEECCCHHHHHHHHHHH
LTSENLSEAFRQAIALDRIEGRWFARRARRAGRHRSR
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERVPQPDPDLLIDFTDVTIRRSGHTLVGPVTWQVELDERWVVLGPNGAGKTSLLRIAAA
CCCCCCCCCCEEEEEEEEEEEECCCEEECCEEEEEEECCEEEEECCCCCCCHHEEEEEEC
ETHPTSGTANLLGETLGRVDVSELRPRIGLSSAALAGRVPRDEKVLDLVVSAGYAVLGRW
CCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RERYDDMDTDRAVDMLESLGAEHLSDRTYGTLSEGERKRVLIARALMTDPELLLLDEPAA
HHHHCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
GLDLGGREELVERLGDLAADPDAPAIVLVTHHVEEIPPGFTHALLLNEGEVVAQGLLDDV
CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCEEEEEECCCHHHHHHHHHHH
LTSENLSEAFRQAIALDRIEGRWFARRARRAGRHRSR
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]

Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]