| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is ilvH [H]
Identifier: 54026202
GI number: 54026202
Start: 4378485
End: 4378988
Strand: Reverse
Name: ilvH [H]
Synonym: nfa42310
Alternate gene names: 54026202
Gene position: 4378988-4378485 (Counterclockwise)
Preceding gene: 54026203
Following gene: 54026201
Centisome position: 72.73
GC content: 67.26
Gene sequence:
>504_bases ATGAGCAGCACCCACACCCTGAGCGTCCTGGTCGAGGACAAGCCGGGCGTGCTGGCGCGGGTGGCGAGCCTGTTCTCCCG CCGCGGGTTCAACATCGAATCGCTGGCGGTCGGCGGCACCGAGATCCCCGACATCTCACGGATGACCATCGTCGTCACCG TCGAGGACCTGCCGCTCGAACAGGTCACCAAACAGCTCAACAAGCTGGTGAACGTGATCAAGATCGTCGAGCAGGACGCC GACGCGTCGGTGGCCCGCGAGCTGATCCTGGTGAAGGTGCGCGCGGACGCGAGCGTGCGGACCCAGGTGATCGAGGCCGT GCAGTTGTTCCGCGCCAAGGTCATCGACGTCTCGCCCGACGCGCTCACCGTCGAGGCGACCGGCACCCGCTCCAAGCTCG ACGCGCTGCTGCGCATGCTCGAGCCCTACGGGATCCGGGAGATCGTGCAGTCCGGTGTGGTCGCCGTCGGTCGCGGACCG AAGTCGATCACGGCGACTCGCTGA
Upstream 100 bases:
>100_bases CGCTCTTCGACGAGGACGAGCAGGCCGCCGAGCCCGCCGTCATCCACGAGGCGATGACCCACGGAGATCGCGCGGCCGAG CAGAACAAGGGGACCGAAGA
Downstream 100 bases:
>100_bases GTACCGAATATCCACCCGTCACCGGCGTCAGCACGGTGCTCCCCGTTCCGGCGGGGCCAGATTTCACAAGCTGTTTCTTC AGAAAGGAAACCACTAGTGG
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSSTHTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGGTEIPDISRMTIVVTVEDLPLEQVTKQLNKLVNVIKIVEQDA DASVARELILVKVRADASVRTQVIEAVQLFRAKVIDVSPDALTVEATGTRSKLDALLRMLEPYGIREIVQSGVVAVGRGP KSITATR
Sequences:
>Translated_167_residues MSSTHTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGGTEIPDISRMTIVVTVEDLPLEQVTKQLNKLVNVIKIVEQDA DASVARELILVKVRADASVRTQVIEAVQLFRAKVIDVSPDALTVEATGTRSKLDALLRMLEPYGIREIVQSGVVAVGRGP KSITATR >Mature_166_residues SSTHTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGGTEIPDISRMTIVVTVEDLPLEQVTKQLNKLVNVIKIVEQDAD ASVARELILVKVRADASVRTQVIEAVQLFRAKVIDVSPDALTVEATGTRSKLDALLRMLEPYGIREIVQSGVVAVGRGPK SITATR
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=156, Percent_Identity=46.1538461538462, Blast_Score=131, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6319837, Length=205, Percent_Identity=28.780487804878, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18044; Mature: 17913
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTHTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGGTEIPDISRMTIVVTVEDLPLE CCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHH QVTKQLNKLVNVIKIVEQDADASVARELILVKVRADASVRTQVIEAVQLFRAKVIDVSPD HHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHEECCCC ALTVEATGTRSKLDALLRMLEPYGIREIVQSGVVAVGRGPKSITATR EEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCCCCC >Mature Secondary Structure SSTHTLSVLVEDKPGVLARVASLFSRRGFNIESLAVGGTEIPDISRMTIVVTVEDLPLE CCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEECCCCHH QVTKQLNKLVNVIKIVEQDADASVARELILVKVRADASVRTQVIEAVQLFRAKVIDVSPD HHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHEECCCC ALTVEATGTRSKLDALLRMLEPYGIREIVQSGVVAVGRGPKSITATR EEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA