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The map label for this gene is ftsY [H]

Identifier: 54026136

GI number: 54026136

Start: 4313214

End: 4314758

Strand: Reverse

Name: ftsY [H]

Synonym: nfa41650

Alternate gene names: 54026136

Gene position: 4314758-4313214 (Counterclockwise)

Preceding gene: 54026138

Following gene: 54026135

Centisome position: 71.66

GC content: 73.66

Gene sequence:

>1545_bases
ATGGTCGTCGTGAGTGCCGAAGCCTGGATTGTGATAGCCGCCGTCGCCGCCCTGCTGCTGGTGGCGCTCGTCGCCGGATT
CGTCCTGTACAAACGCCGCCGGATCTCGCTGTCCGCCCCCACCGCGGAGAAGGAGCTGACCGACCGCTCGGGCGGCTACA
CGGCAGCGGGCGGATTCACCTTCAGCCAGGGCGGGACGGCGACGGCCACCCGCCCGGAGCCGCTGCAACGCACCGACACC
GAGGGGCAACCGCACGTCGGTGACGACGCCGCCGTGCCGCGCGACGCGCCCCGGCGCGGCATCACCAACGTGCCGCTGCC
CGAGGGCGATGTCACCGAGGGGCCCAGCGGCGGCGGCGCCACCGTCGCCGAACCGGAACCCGAGACCACCCCCGCACCCG
ATCTGCCCGGCACCACGGCACCGGCCACCGACACCGCGCCCACCGACACGGCGCCCACCCATACCGCGCCCACCGATACC
GCGCCCACCGACACGCCGGCACCTGCCGAGACCACTCCGGCAGCGCCCGCCACGACCCCGCCGGTCGCCGAGCCGGACAC
GGTCGTCCCCGAGGTGCCCGCCACCCCCGCCGGTGCCGAGACCGCGCCCGCCCTGGAGGAGATCGAGCCCACCGCGGGCA
GGCTGACCAAGCTGCGTGGCAGGCTCTCGCGCTCCCAGAACGCCGTCGGCAAGAGCCTGCTCGGCCTGCTCGGCGGCGGC
GACCTGGACGAGGACTCCTGGGAGGAGATCGAGGACACCCTGGTGCTGGCCGATCTCGGCACGGCGAGCACCACCGCCGT
CGTCGAGCGGCTGCGCGAGGAGATGGCCGCGCGCAGTGTGCGCACCCCGGAACAGGCGCGTCAGGTGCTGCGCGACGTAC
TCGTGGAGGCACTGCGCCCGGAGCTGGACCGCTCGATCCGCGCGCTGCCGCATCCGGATCACCCGGCGATCCTGCTGGTC
GTCGGCGTCAACGGCACCGGGAAGACCACCACGACCGGCAAGCTGGCCCGCGTGCTGGTCGCCGACGGCCGTCGCGTGCT
GCTCGGCGCTGCCGACACCTTCCGCGCCGCCGCCGCCGATCAGTTGCAGACCTGGGGTGAGCGGGTCGGCGCTGAGACCG
TGCGCGGCAAGGAGGGCGCCGATCCGGCCGCCGTCGCCTTCGACGCGGTCGCCGCGGGCATCGAGCGCGGCGTGGACGCC
GTGCTCATCGACACCGCGGGCCGCCTGCACACCAAGACCGGCCTGATGGACGAGCTCGGCAAGGTCAAGCGCGTGGTGGA
GAAGAAGGCCGCCGTCGACGAGGTGCTGCTGGTGCTCGACGCCACCGTCGGCCAGAACGGCCTGATGCAGGCGCGGGTCT
TCGCCGAGGTCGTCGACATCACCGGTGTGGTGCTGACCAAGCTGGACGGCACCGCCAAGGGCGGCATCGTCTTCCAGGTC
CAGCACGAACTCGGCGTGCCGGTCAAGCTGGTCGGCCTCGGCGAGGGCGCCGACGACCTCGCCCCCTTCGAAGCGGGCGC
CTTCGTGGACGCCCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
ATTGTTCCGGGGCGAGAAGTTCCGCAGGACAAGAAATCTCGAGGGGCTGTGTCACCGCTCCCGGCCGCGCCGAACAGGAC
CGATGTGGCGTTCTGCAAGG

Downstream 100 bases:

>100_bases
GCCGCACCACCGAACCCACCGCGGCCGGGCAGCGCGCCCGGCCGCGGCGTGCGCTGCCCGGCTCGCCCGACATGTCCGCA
CACCAGGGGCGATACCTGTG

Product: putative signal recognition particle

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MVVVSAEAWIVIAAVAALLLVALVAGFVLYKRRRISLSAPTAEKELTDRSGGYTAAGGFTFSQGGTATATRPEPLQRTDT
EGQPHVGDDAAVPRDAPRRGITNVPLPEGDVTEGPSGGGATVAEPEPETTPAPDLPGTTAPATDTAPTDTAPTHTAPTDT
APTDTPAPAETTPAAPATTPPVAEPDTVVPEVPATPAGAETAPALEEIEPTAGRLTKLRGRLSRSQNAVGKSLLGLLGGG
DLDEDSWEEIEDTLVLADLGTASTTAVVERLREEMAARSVRTPEQARQVLRDVLVEALRPELDRSIRALPHPDHPAILLV
VGVNGTGKTTTTGKLARVLVADGRRVLLGAADTFRAAAADQLQTWGERVGAETVRGKEGADPAAVAFDAVAAGIERGVDA
VLIDTAGRLHTKTGLMDELGKVKRVVEKKAAVDEVLLVLDATVGQNGLMQARVFAEVVDITGVVLTKLDGTAKGGIVFQV
QHELGVPVKLVGLGEGADDLAPFEAGAFVDALLG

Sequences:

>Translated_514_residues
MVVVSAEAWIVIAAVAALLLVALVAGFVLYKRRRISLSAPTAEKELTDRSGGYTAAGGFTFSQGGTATATRPEPLQRTDT
EGQPHVGDDAAVPRDAPRRGITNVPLPEGDVTEGPSGGGATVAEPEPETTPAPDLPGTTAPATDTAPTDTAPTHTAPTDT
APTDTPAPAETTPAAPATTPPVAEPDTVVPEVPATPAGAETAPALEEIEPTAGRLTKLRGRLSRSQNAVGKSLLGLLGGG
DLDEDSWEEIEDTLVLADLGTASTTAVVERLREEMAARSVRTPEQARQVLRDVLVEALRPELDRSIRALPHPDHPAILLV
VGVNGTGKTTTTGKLARVLVADGRRVLLGAADTFRAAAADQLQTWGERVGAETVRGKEGADPAAVAFDAVAAGIERGVDA
VLIDTAGRLHTKTGLMDELGKVKRVVEKKAAVDEVLLVLDATVGQNGLMQARVFAEVVDITGVVLTKLDGTAKGGIVFQV
QHELGVPVKLVGLGEGADDLAPFEAGAFVDALLG
>Mature_514_residues
MVVVSAEAWIVIAAVAALLLVALVAGFVLYKRRRISLSAPTAEKELTDRSGGYTAAGGFTFSQGGTATATRPEPLQRTDT
EGQPHVGDDAAVPRDAPRRGITNVPLPEGDVTEGPSGGGATVAEPEPETTPAPDLPGTTAPATDTAPTDTAPTHTAPTDT
APTDTPAPAETTPAAPATTPPVAEPDTVVPEVPATPAGAETAPALEEIEPTAGRLTKLRGRLSRSQNAVGKSLLGLLGGG
DLDEDSWEEIEDTLVLADLGTASTTAVVERLREEMAARSVRTPEQARQVLRDVLVEALRPELDRSIRALPHPDHPAILLV
VGVNGTGKTTTTGKLARVLVADGRRVLLGAADTFRAAAADQLQTWGERVGAETVRGKEGADPAAVAFDAVAAGIERGVDA
VLIDTAGRLHTKTGLMDELGKVKRVVEKKAAVDEVLLVLDATVGQNGLMQARVFAEVVDITGVVLTKLDGTAKGGIVFQV
QHELGVPVKLVGLGEGADDLAPFEAGAFVDALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=268, Percent_Identity=28.7313432835821, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=31.4410480349345, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI295424842, Length=317, Percent_Identity=29.6529968454259, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI23308697, Length=317, Percent_Identity=29.6529968454259, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=32.8358208955224, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI1789874, Length=313, Percent_Identity=41.5335463258786, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1788963, Length=311, Percent_Identity=33.1189710610932, Blast_Score=143, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17539958, Length=295, Percent_Identity=29.1525423728814, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=293, Percent_Identity=31.3993174061433, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=243, Percent_Identity=30.8641975308642, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6320498, Length=285, Percent_Identity=28.4210526315789, Blast_Score=95, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=30.8243727598566, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24641198, Length=342, Percent_Identity=27.7777777777778, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 52926; Mature: 52926

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVSAEAWIVIAAVAALLLVALVAGFVLYKRRRISLSAPTAEKELTDRSGGYTAAGGFT
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCEEEECCEE
FSQGGTATATRPEPLQRTDTEGQPHVGDDAAVPRDAPRRGITNVPLPEGDVTEGPSGGGA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVAEPEPETTPAPDLPGTTAPATDTAPTDTAPTHTAPTDTAPTDTPAPAETTPAAPATTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVAEPDTVVPEVPATPAGAETAPALEEIEPTAGRLTKLRGRLSRSQNAVGKSLLGLLGGG
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLDEDSWEEIEDTLVLADLGTASTTAVVERLREEMAARSVRTPEQARQVLRDVLVEALRP
CCCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ELDRSIRALPHPDHPAILLVVGVNGTGKTTTTGKLARVLVADGRRVLLGAADTFRAAAAD
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHH
QLQTWGERVGAETVRGKEGADPAAVAFDAVAAGIERGVDAVLIDTAGRLHTKTGLMDELG
HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
KVKRVVEKKAAVDEVLLVLDATVGQNGLMQARVFAEVVDITGVVLTKLDGTAKGGIVFQV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEE
QHELGVPVKLVGLGEGADDLAPFEAGAFVDALLG
ECCCCCCEEEEECCCCCHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVVVSAEAWIVIAAVAALLLVALVAGFVLYKRRRISLSAPTAEKELTDRSGGYTAAGGFT
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCCEEEECCEE
FSQGGTATATRPEPLQRTDTEGQPHVGDDAAVPRDAPRRGITNVPLPEGDVTEGPSGGGA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TVAEPEPETTPAPDLPGTTAPATDTAPTDTAPTHTAPTDTAPTDTPAPAETTPAAPATTP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVAEPDTVVPEVPATPAGAETAPALEEIEPTAGRLTKLRGRLSRSQNAVGKSLLGLLGGG
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLDEDSWEEIEDTLVLADLGTASTTAVVERLREEMAARSVRTPEQARQVLRDVLVEALRP
CCCCCHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ELDRSIRALPHPDHPAILLVVGVNGTGKTTTTGKLARVLVADGRRVLLGAADTFRAAAAD
HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHH
QLQTWGERVGAETVRGKEGADPAAVAFDAVAAGIERGVDAVLIDTAGRLHTKTGLMDELG
HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
KVKRVVEKKAAVDEVLLVLDATVGQNGLMQARVFAEVVDITGVVLTKLDGTAKGGIVFQV
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEE
QHELGVPVKLVGLGEGADDLAPFEAGAFVDALLG
ECCCCCCEEEEECCCCCHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]