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The map label for this gene is yyaP [H]

Identifier: 54026129

GI number: 54026129

Start: 4304799

End: 4305353

Strand: Reverse

Name: yyaP [H]

Synonym: nfa41580

Alternate gene names: 54026129

Gene position: 4305353-4304799 (Counterclockwise)

Preceding gene: 54026130

Following gene: 54026128

Centisome position: 71.5

GC content: 69.01

Gene sequence:

>555_bases
GTGCGCGATCTGGTCGTCACCGAGAACATCACCGTCGACGGGGTGATCGAGGCCACCGAGGGATGGTTCACCGTCGGCAA
CGACGCCCTCGCGGAGCAGGCCGACATCAACGCCGAGTTGATGGCCCACACCGCCGCCTGCGATGCGGTGCTGTTCGGTC
GCCGCACCTTCGAGGACATGCGCGGATACTGGCCGCGGCAGGACGACGACCGCTCCGGCATCACCGATGACCTGAACACG
ATCCGCAAGTACGTGGTCTCCCGCACCATGACCGACCCCGCCTGGCACAACTCGGTGGTCCTGCGGGGGCTCGACGAGGT
CGCGGCGGTGAAGCGGGAGCCGGGCAAGGACATCGTCTGCACCGGGAGCATCGAGCTGGTGCACCAGCTGATCGCGGCGG
GGCTGGTCGACGAGTACCGGTTGTTCGTCTACCCGGTGGTGCTCGGGCGTGGCGCCCGCCTGTTCGGTGAGGGAGCGCGG
CTGCCACGGCTGCGGCTCGCCGAGAGCAAGCGGTTCCGTTCCGGGGTGGTGCTGCTGCGGTACCGCCCGTCCTGA

Upstream 100 bases:

>100_bases
CGGTGACCGGCGCGTCGACGAGGTTCCGGCGGAGGCGGGCGGGCGTCGACGGTCCGCCTTCCCCGCGTGGGGGTAGCACC
GATCCGAGGAGGAGGTCGCT

Downstream 100 bases:

>100_bases
CCACGGACCGATTTCGAGCCGGGCTGCCCCGTCTGGCACAATGGACCACCGTCCTGGACAGGACAGTGTCAGCCCGTCTC
CGGTTACGTACCGCGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRDLVVTENITVDGVIEATEGWFTVGNDALAEQADINAELMAHTAACDAVLFGRRTFEDMRGYWPRQDDDRSGITDDLNT
IRKYVVSRTMTDPAWHNSVVLRGLDEVAAVKREPGKDIVCTGSIELVHQLIAAGLVDEYRLFVYPVVLGRGARLFGEGAR
LPRLRLAESKRFRSGVVLLRYRPS

Sequences:

>Translated_184_residues
MRDLVVTENITVDGVIEATEGWFTVGNDALAEQADINAELMAHTAACDAVLFGRRTFEDMRGYWPRQDDDRSGITDDLNT
IRKYVVSRTMTDPAWHNSVVLRGLDEVAAVKREPGKDIVCTGSIELVHQLIAAGLVDEYRLFVYPVVLGRGARLFGEGAR
LPRLRLAESKRFRSGVVLLRYRPS
>Mature_184_residues
MRDLVVTENITVDGVIEATEGWFTVGNDALAEQADINAELMAHTAACDAVLFGRRTFEDMRGYWPRQDDDRSGITDDLNT
IRKYVVSRTMTDPAWHNSVVLRGLDEVAAVKREPGKDIVCTGSIELVHQLIAAGLVDEYRLFVYPVVLGRGARLFGEGAR
LPRLRLAESKRFRSGVVLLRYRPS

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 20579; Mature: 20579

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLVVTENITVDGVIEATEGWFTVGNDALAEQADINAELMAHTAACDAVLFGRRTFEDM
CCCEEEECCCEECEEEECCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RGYWPRQDDDRSGITDDLNTIRKYVVSRTMTDPAWHNSVVLRGLDEVAAVKREPGKDIVC
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEE
TGSIELVHQLIAAGLVDEYRLFVYPVVLGRGARLFGEGARLPRLRLAESKRFRSGVVLLR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCCEEEEE
YRPS
ECCC
>Mature Secondary Structure
MRDLVVTENITVDGVIEATEGWFTVGNDALAEQADINAELMAHTAACDAVLFGRRTFEDM
CCCEEEECCCEECEEEECCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RGYWPRQDDDRSGITDDLNTIRKYVVSRTMTDPAWHNSVVLRGLDEVAAVKREPGKDIVC
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHCCCCCCEEE
TGSIELVHQLIAAGLVDEYRLFVYPVVLGRGARLFGEGARLPRLRLAESKRFRSGVVLLR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCCEEEEE
YRPS
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]