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The map label for this gene is yraN [C]

Identifier: 54026114

GI number: 54026114

Start: 4290601

End: 4290984

Strand: Reverse

Name: yraN [C]

Synonym: nfa41430

Alternate gene names: 54026114

Gene position: 4290984-4290601 (Counterclockwise)

Preceding gene: 54026115

Following gene: 54026113

Centisome position: 71.26

GC content: 69.53

Gene sequence:

>384_bases
GTGGCGTCGGCGACCATCCTGGCCCGTGTGGGAGACAAACAGGCGCTCGGCGCACACGGGGAAGAACTGGCCGCCCGCTT
CCTGCGGGACGCGGGCATGGAGATCGTCGCGCGGAACTGGCGGTGCCGCTACGGCGAGCTGGACCTGATCGCGCGTGACG
CACAGACCACCGCCTTCGTCGAGGTCAAGACCCGCCGCGGGCTCGGGTTCGGCACGCCCGCCGAAGCGGTCACCTTCACC
AAGCGCCAGCGGATCCGCCGCCTGGCTCTGCTGTGGCTGGCCGAACAGGACGGGCCCTGGCAACAGATCCGGTTCGACGT
GGTCTCGGTGCTGATGACACCCGGGCATCGCCCCGTCATCGACCACCTGAAGGCGGTCTTCTGA

Upstream 100 bases:

>100_bases
AAGCCGGACCTGCGCCTGCCCGAGTGACGCGGGCGCGTTGTCCACAGCCGTACGCTGATCCCCAGGGCGGCTGAAAGCCC
AGGGCGCCGCGTCGGGATCG

Downstream 100 bases:

>100_bases
TGGCGCTCGGCCGCGCCCACTCGGTCGCCGTCGCCGGGGTGGACGGCCAGTTGGTGGAGATCGAGGCCGACATCGGCCAG
GGGCTGCCCTCGGTGCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MASATILARVGDKQALGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDAQTTAFVEVKTRRGLGFGTPAEAVTFT
KRQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTPGHRPVIDHLKAVF

Sequences:

>Translated_127_residues
MASATILARVGDKQALGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDAQTTAFVEVKTRRGLGFGTPAEAVTFT
KRQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTPGHRPVIDHLKAVF
>Mature_126_residues
ASATILARVGDKQALGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDAQTTAFVEVKTRRGLGFGTPAEAVTFTK
RQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTPGHRPVIDHLKAVF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=38.9380530973451, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4143_NOCFA (Q5YS49)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_120356.1
- ProteinModelPortal:   Q5YS49
- GeneID:   3108894
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa41430
- NMPDR:   fig|247156.1.peg.3997
- HOGENOM:   HBG710155
- OMA:   VERNWRC
- ProtClustDB:   PRK12497
- BioCyc:   NFAR247156:NFA41430-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14271; Mature: 14140

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASATILARVGDKQALGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDAQTTAFV
CCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCEEEEECCCCCEEEE
EVKTRRGLGFGTPAEAVTFTKRQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTPGHRPVI
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH
DHLKAVF
HHHHHCC
>Mature Secondary Structure 
ASATILARVGDKQALGAHGEELAARFLRDAGMEIVARNWRCRYGELDLIARDAQTTAFV
CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCCCEEEEECCCCCEEEE
EVKTRRGLGFGTPAEAVTFTKRQRIRRLALLWLAEQDGPWQQIRFDVVSVLMTPGHRPVI
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHH
DHLKAVF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA