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The map label for this gene is smf [C]

Identifier: 54026111

GI number: 54026111

Start: 4286906

End: 4288084

Strand: Reverse

Name: smf [C]

Synonym: nfa41400

Alternate gene names: 54026111

Gene position: 4288084-4286906 (Counterclockwise)

Preceding gene: 54026113

Following gene: 54026110

Centisome position: 71.22

GC content: 74.47

Gene sequence:

>1179_bases
GTGGTGTGCGCGTCCTCGGCCGATCACGACGCGCGGCGACTGGCGTGGGTGTATCTCTCGCGGGTGGTGGAGGGACCGTG
TGCGGCGCTGTCGGCGCTGATCGAGTCGGTGGGCGTGGTGGAGGCGGCGCGCGCTGTGCGCGAGCGGGAGTTGCCCGAGG
CGTTGCGGGGTGCCACCCGAGCACGGCGCGAGGTCGACCGCGCCGAGGCCGATCTCGCGACGATGGCACGGCTCGGTGGC
CGGGTGGTGACTCCCGAGGACGCGGAGTGGCCTGCTTGGCGGATGCTCGGGCTGAGTCAGCTGGCGGGCGGACCGGACCC
CGACGGCGCGGTGCCGCTGGTGCTGTGGGTGCGGGGGCCGCGTTCGCTGCTGGAGTCCAGCGAGCAGGCGTTGGCGGTGG
TCGGTTCCCGGTGCAGCAGCGGTTACGGCAACCGGGTGACGGCGGAGCTCGCGGGCGATCTGGCCGCCCGCGGCTGGACC
ATCGTCTCCGGTGCGGCCTTCGGCATCGACGCGATGGCCCACCGGGCCGCCCTGGCCGTCGGCGGTCCCACCATCGCCGT
CCTCGCCTGTGGCGTGGACCGGCCCTATCCGGCCCAGCACGACCGGCTGCTCGCCGAGATCGCCGAGGTGGGGCTGGTCG
TGAGCGAGTATCCGCCCGGCACCGTCCCGCACAAACACCGCTTCCTCGCGCGCAACCGATTGATCGCCGGGCTGGCCGAC
GGTGTCCTCGTCGTCGAGGCCGGTTTGCGCAGCGGCGCCCGCAACACCGTGAAATGGGCGCGCCGCCTGTGCCGCCCCGC
CCTCGCCGTGCCCGGCCCGGTCACCTCCGCCGCATCGGTCGGCTGCCACCGCATGATCCGCGAGGGCGAGGCGCTGCTCG
TCACCCGCGCCGAGGAGGTGATCGACGAAGCGGGTCCGCTGCGGTTGTCGCTGCCGGGTGGGACCGTGACCACCGTGGCC
GAGTCGCTCACCGGGGACGAAGCGGTCGTCTACGCGGCGCTGCCGGCCATCGGCTCCCGGCTGCCCGGCGAACTCTGTGG
CACCACGGGCCTGTCCACACCGGCCGTTCGCGCGGCACTGGTCGCGCTGGAGATGGCGGGGCTGGTCGGCGCCGACGCCA
CCGGATGGTCACGTCTGGCCCGCCCTCGACGGTCCGGCGGTACCGCCGCGGATGGGTGA

Upstream 100 bases:

>100_bases
CGGCGACGTGGACGGCGGCGGTGCGGACGGCGGCGGTGCGGATGGCGGCGGCGGGGGCATCGAGGTCAGGGGCGGTGGCG
AAGCCGGGAGCGGCCCCCGC

Downstream 100 bases:

>100_bases
TTCGATACTCGGACCCGCCCCGGGGTCGGCGGCCGACGGCGGCGCGGGAACTTGTCAACCGCGAGCGGGCGGGTCACGGT
GGGGGAATGGAGGGTTTGCC

Product: putative Rossmann-fold nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MVCASSADHDARRLAWVYLSRVVEGPCAALSALIESVGVVEAARAVRERELPEALRGATRARREVDRAEADLATMARLGG
RVVTPEDAEWPAWRMLGLSQLAGGPDPDGAVPLVLWVRGPRSLLESSEQALAVVGSRCSSGYGNRVTAELAGDLAARGWT
IVSGAAFGIDAMAHRAALAVGGPTIAVLACGVDRPYPAQHDRLLAEIAEVGLVVSEYPPGTVPHKHRFLARNRLIAGLAD
GVLVVEAGLRSGARNTVKWARRLCRPALAVPGPVTSAASVGCHRMIREGEALLVTRAEEVIDEAGPLRLSLPGGTVTTVA
ESLTGDEAVVYAALPAIGSRLPGELCGTTGLSTPAVRAALVALEMAGLVGADATGWSRLARPRRSGGTAADG

Sequences:

>Translated_392_residues
MVCASSADHDARRLAWVYLSRVVEGPCAALSALIESVGVVEAARAVRERELPEALRGATRARREVDRAEADLATMARLGG
RVVTPEDAEWPAWRMLGLSQLAGGPDPDGAVPLVLWVRGPRSLLESSEQALAVVGSRCSSGYGNRVTAELAGDLAARGWT
IVSGAAFGIDAMAHRAALAVGGPTIAVLACGVDRPYPAQHDRLLAEIAEVGLVVSEYPPGTVPHKHRFLARNRLIAGLAD
GVLVVEAGLRSGARNTVKWARRLCRPALAVPGPVTSAASVGCHRMIREGEALLVTRAEEVIDEAGPLRLSLPGGTVTTVA
ESLTGDEAVVYAALPAIGSRLPGELCGTTGLSTPAVRAALVALEMAGLVGADATGWSRLARPRRSGGTAADG
>Mature_392_residues
MVCASSADHDARRLAWVYLSRVVEGPCAALSALIESVGVVEAARAVRERELPEALRGATRARREVDRAEADLATMARLGG
RVVTPEDAEWPAWRMLGLSQLAGGPDPDGAVPLVLWVRGPRSLLESSEQALAVVGSRCSSGYGNRVTAELAGDLAARGWT
IVSGAAFGIDAMAHRAALAVGGPTIAVLACGVDRPYPAQHDRLLAEIAEVGLVVSEYPPGTVPHKHRFLARNRLIAGLAD
GVLVVEAGLRSGARNTVKWARRLCRPALAVPGPVTSAASVGCHRMIREGEALLVTRAEEVIDEAGPLRLSLPGGTVTTVA
ESLTGDEAVVYAALPAIGSRLPGELCGTTGLSTPAVRAALVALEMAGLVGADATGWSRLARPRRSGGTAADG

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994932, Length=335, Percent_Identity=35.8208955223881, Blast_Score=146, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40628; Mature: 40628

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCASSADHDARRLAWVYLSRVVEGPCAALSALIESVGVVEAARAVRERELPEALRGATR
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARREVDRAEADLATMARLGGRVVTPEDAEWPAWRMLGLSQLAGGPDPDGAVPLVLWVRGP
HHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCH
RSLLESSEQALAVVGSRCSSGYGNRVTAELAGDLAARGWTIVSGAAFGIDAMAHRAALAV
HHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHEE
GGPTIAVLACGVDRPYPAQHDRLLAEIAEVGLVVSEYPPGTVPHKHRFLARNRLIAGLAD
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
GVLVVEAGLRSGARNTVKWARRLCRPALAVPGPVTSAASVGCHRMIREGEALLVTRAEEV
CEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHH
IDEAGPLRLSLPGGTVTTVAESLTGDEAVVYAALPAIGSRLPGELCGTTGLSTPAVRAAL
HHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHCCCCCCCHHHHHHH
VALEMAGLVGADATGWSRLARPRRSGGTAADG
HHHHHHHHHCCCCCCHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MVCASSADHDARRLAWVYLSRVVEGPCAALSALIESVGVVEAARAVRERELPEALRGATR
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARREVDRAEADLATMARLGGRVVTPEDAEWPAWRMLGLSQLAGGPDPDGAVPLVLWVRGP
HHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCH
RSLLESSEQALAVVGSRCSSGYGNRVTAELAGDLAARGWTIVSGAAFGIDAMAHRAALAV
HHHHHCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHEE
GGPTIAVLACGVDRPYPAQHDRLLAEIAEVGLVVSEYPPGTVPHKHRFLARNRLIAGLAD
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHC
GVLVVEAGLRSGARNTVKWARRLCRPALAVPGPVTSAASVGCHRMIREGEALLVTRAEEV
CEEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHH
IDEAGPLRLSLPGGTVTTVAESLTGDEAVVYAALPAIGSRLPGELCGTTGLSTPAVRAAL
HHCCCCEEEECCCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHCCCCCCCHHHHHHH
VALEMAGLVGADATGWSRLARPRRSGGTAADG
HHHHHHHHHCCCCCCHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]