Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025882

Identifier: 54025882

GI number: 54025882

Start: 4116981

End: 4117910

Strand: Reverse

Name: 54025882

Synonym: nfa39120

Alternate gene names: NA

Gene position: 4117910-4116981 (Counterclockwise)

Preceding gene: 54025883

Following gene: 54025881

Centisome position: 68.39

GC content: 59.89

Gene sequence:

>930_bases
TTGATGCGGGAATCTGCCCGCGTCGAATTCTTCGGTCCTGACGGCTTGCATTTCATCGTCAATGGCGCGGGTGCGTCGCG
GAAGCTCTTTCTGTCCTCGGACATCAAAGGGATCTACGACGCACCCGTCCAGACGCGACGGAAGTCGAGCGCGTTTCAGA
AGGGTTCGACCTACCTGGGCAAGTCATACAAAGAGCGGCGCATCACCTTCGGTGTCGACATCAAAGGCGACACGCCGGAG
GAATGGCAGCAGCTACAGGACGACTGGAATTCCATATGGGATTACGAACCTGACCCGTGGGATCCAGACTCGACGCTGAC
GAAAATGTCGATCACGACCCCGATATCGGGGACGCGCAGCCTATGGCTGGCGAAAGACGACACGGTCGAATTCGAGTCGA
AACACGATCCGCACATCACACGGTCGTCGCGTGTGTCGATGGCTGTGGTCGCGGACCAGCCCTTCTTCTTCGAAGACAAA
TGGGAGAACAGCCCGTACGACTATTTTGAGACCGGCTCGGCCGGAACCTCGGAAGGGTTCGTCACCATTTCCAACCCCTG
CGATCAGCCGATGTGGCTGCAATGGGTGGTCACCCGCGGCAAGTGGACGCTTCCTGACTTCTCCTGGAGGGGGAAGAAGC
ACCATAGGGTGCCGGGCGGGGAATGGGCGAACCGGAAGATCACCCTGCCTGAATTGACCGCGCTGGAGGGCGGCGCCCGG
ATCACTCTCTACCGGGACAAACTTCAGGTCCGCGACTTCGCGGGCACTAATCTGGCAGGCCGCATGAACGGCATCTCATT
CGAGCATGTCGTCCCACCGAAAACCCCGGAAACCAATCTTCCGGTCAAGGTTGAAAACGCGCCTGTCGGCGGCGGCCGTG
TCGAAGTCTACTGCCAGCGACGCTGGGGCCACGCATGGGAGAGCCGATGA

Upstream 100 bases:

>100_bases
CGATCCAGACGCGCGACGTTGATGAGGGGTTCCGGAAGGCGCAGCAAATCGCTGACTTGCGCGCTATCCAGCACACTGGC
ACTGCAAGGGGCTAATCACG

Downstream 100 bases:

>100_bases
CCGATCTGCTCGAACTCTCCCCCGAAGAACAGTGCCGCGCGATCTGGGAAGCCACCCTCGCCGCGGAAGAAGCCGACCGA
CGCGCGCGCCTGGTACCGCC

Product: putative phage tail

Products: NA

Alternate protein names: Phage Tail

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MMRESARVEFFGPDGLHFIVNGAGASRKLFLSSDIKGIYDAPVQTRRKSSAFQKGSTYLGKSYKERRITFGVDIKGDTPE
EWQQLQDDWNSIWDYEPDPWDPDSTLTKMSITTPISGTRSLWLAKDDTVEFESKHDPHITRSSRVSMAVVADQPFFFEDK
WENSPYDYFETGSAGTSEGFVTISNPCDQPMWLQWVVTRGKWTLPDFSWRGKKHHRVPGGEWANRKITLPELTALEGGAR
ITLYRDKLQVRDFAGTNLAGRMNGISFEHVVPPKTPETNLPVKVENAPVGGGRVEVYCQRRWGHAWESR

Sequences:

>Translated_309_residues
MMRESARVEFFGPDGLHFIVNGAGASRKLFLSSDIKGIYDAPVQTRRKSSAFQKGSTYLGKSYKERRITFGVDIKGDTPE
EWQQLQDDWNSIWDYEPDPWDPDSTLTKMSITTPISGTRSLWLAKDDTVEFESKHDPHITRSSRVSMAVVADQPFFFEDK
WENSPYDYFETGSAGTSEGFVTISNPCDQPMWLQWVVTRGKWTLPDFSWRGKKHHRVPGGEWANRKITLPELTALEGGAR
ITLYRDKLQVRDFAGTNLAGRMNGISFEHVVPPKTPETNLPVKVENAPVGGGRVEVYCQRRWGHAWESR
>Mature_309_residues
MMRESARVEFFGPDGLHFIVNGAGASRKLFLSSDIKGIYDAPVQTRRKSSAFQKGSTYLGKSYKERRITFGVDIKGDTPE
EWQQLQDDWNSIWDYEPDPWDPDSTLTKMSITTPISGTRSLWLAKDDTVEFESKHDPHITRSSRVSMAVVADQPFFFEDK
WENSPYDYFETGSAGTSEGFVTISNPCDQPMWLQWVVTRGKWTLPDFSWRGKKHHRVPGGEWANRKITLPELTALEGGAR
ITLYRDKLQVRDFAGTNLAGRMNGISFEHVVPPKTPETNLPVKVENAPVGGGRVEVYCQRRWGHAWESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35211; Mature: 35211

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRESARVEFFGPDGLHFIVNGAGASRKLFLSSDIKGIYDAPVQTRRKSSAFQKGSTYLG
CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEECCCHHHHHHHHHHHCCCHHHC
KSYKERRITFGVDIKGDTPEEWQQLQDDWNSIWDYEPDPWDPDSTLTKMSITTPISGTRS
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCE
LWLAKDDTVEFESKHDPHITRSSRVSMAVVADQPFFFEDKWENSPYDYFETGSAGTSEGF
EEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCEEECCCCCCCCCE
VTISNPCDQPMWLQWVVTRGKWTLPDFSWRGKKHHRVPGGEWANRKITLPELTALEGGAR
EEECCCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCE
ITLYRDKLQVRDFAGTNLAGRMNGISFEHVVPPKTPETNLPVKVENAPVGGGRVEVYCQR
EEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEE
RWGHAWESR
CCCCCCCCC
>Mature Secondary Structure
MMRESARVEFFGPDGLHFIVNGAGASRKLFLSSDIKGIYDAPVQTRRKSSAFQKGSTYLG
CCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEECCCHHHHHHHHHHHCCCHHHC
KSYKERRITFGVDIKGDTPEEWQQLQDDWNSIWDYEPDPWDPDSTLTKMSITTPISGTRS
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCE
LWLAKDDTVEFESKHDPHITRSSRVSMAVVADQPFFFEDKWENSPYDYFETGSAGTSEGF
EEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCEEECCCCCCCCCE
VTISNPCDQPMWLQWVVTRGKWTLPDFSWRGKKHHRVPGGEWANRKITLPELTALEGGAR
EEECCCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCE
ITLYRDKLQVRDFAGTNLAGRMNGISFEHVVPPKTPETNLPVKVENAPVGGGRVEVYCQR
EEEEECCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEE
RWGHAWESR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA