| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is ftsK [H]
Identifier: 54025834
GI number: 54025834
Start: 4077942
End: 4080530
Strand: Reverse
Name: ftsK [H]
Synonym: nfa38640
Alternate gene names: 54025834
Gene position: 4080530-4077942 (Counterclockwise)
Preceding gene: 54025835
Following gene: 54025832
Centisome position: 67.77
GC content: 71.3
Gene sequence:
>2589_bases ATGGCAGGTAAGTCCCGCAGCACCACGACCAGTCGGGCGCGGGCGGGATCGGCCCGGGGGCGGACGACGGCGGCACGGTC TCGCACGCCGCGCGCGAGCGGTACCCCGCGCGCGGGCGCGGCGCCCCGAGCCCGCGCCACACCGGCGCGCAAGCCCGCCC GTCGCCGGTCCGACACCGCGCCGTTGGCGGTGCTCGGCCGCGGCATCAGCGGCGGCTGGACGATGCTGGCGCGCGGTATC GGCGCCACCACCCGGACATTGAGCCGGGCCGGCGAGATCGAACACGGTCACCGCCGCGACGGCATCGCGCTGGCCCTGCT CGGCCTGAGCGGGGTGATCGCCGCGGCCGTCTGGCTCTCGGCGGGCGGGCCCATCGGACGCTGGGTGGAGGGCGTCATCC GGGCGATCTCCGGTTCCGCCTCGGCCGCACTGCCTTTCGTCGCCACCGGCATCGCGATCGTGTTGATGCGCACCGAGCCG CGCCCGGAGATCCGGCCGCGCCTGGTGCTCGGCGGCCTGCTGATCGGCTTGCCCGCCCTGGGCGTCTGGCATCTGGCCGC GGGCGCGCCGACCGATGCCGCGGGCCGCGCGCACGCGGCGGGATTCGTGGGCTACGTGCTCGGCGGCCCGCTGGCCGACG GGCTCACCGCCTGGCTGGCGGTGCCGATCCTGGTGCTGGCCATCGTCTTCGGCGTCCTGCTCGTCACCGGTACCACCGTT CGCGAGGTGCCCGCCCGGCTGCGCGAGATCTTCGGCACGGCCAGCGGTGGCGACGAATACGGTGACTACGACGGTGGTTT CGACCCCATCGGCTACGACGCCGACGGTTTCCCGCTGCACCACGGCCGGTCCCGCCGCCGCGGGCGCACCCCGGAGGAGA ACTACCCGCCCGACGAGTTCGCCGGGTCCGACGCCGTCACCGAGGTACTCGGCGACACGCTGCCCGGCGAGCCGCCGCTG CGCGATCCGAAGCCGATCGCCGCGAGCCCGCCCGCCGAGCCGCCCAAGCCGAAGAAGCGCCCGGCGCCGCCGGTGGCCGA CCAGACCCCGCCGCCGCCCCCGGAACCGGAGTTCGTGGCCGACCGGGTGATCGAGGGCGACTACACGTTGCCGCCGATGA ACCTGCTCACCGACGGCGACCCACCCAAGAAGCGCAGCGCCGCCAACGAATCGATGATCGAGGCGATCACCGAGGTGCTG GTGCAGTTCAAGATCGACGCGGCGGTCACCGGCTTCGTGCGCGGCCCGACGGTCACCCGCTACGAGGTGGAGCTCGGCCC CGGCGTGAAGGTGGAGAAGATCACCGCGCTGGCCCGCAACATCGCCTATGCGGTGGCCACAGAGAACGTGCGGTTGCTCG CGCCGATCCCCGGCAAGTCCGCGGTGGGCATCGAGGTGCCCAACGCCGATCGCGAGCTGGTGCGCCTGGCCGACGTGCTC AAGGCGCCCTCGACCCGCAACGATCACCATCCGCTGGTGATCGGCCTCGGCAAGAACATCGAGGGCGAATTCGTCTCGGC GAACCTGGCCAAGATGCCGCACCTGCTGGTCGCCGGTTCCACCGGCTCCGGCAAGTCGAGTTTCGTGAACTCGATGCTGG TCTCGCTGCTGCAGCGGGCCACCCCCGACGAGGTGCGGATGATCCTCATCGACCCGAAGATGGTCGAGCTCACCCCCTAC GAGGGCATTCCGCACCTGATCACGCCCATCATCACCCAGCCGAAGAAGGCGGCCGCCGCGCTGGCCTGGCTGGTGGAGGA GATGGAGCAGCGCTACCAGGACATGCAGGCCAACAAGGTCCGCCACATCGACGACTTCAACAAGAAGGTCAAGTCCGGCG CGATCACGGCGCCGCTGGGCAGCGAGCGCGTGTACCGGCCCTACCCCTACATTCTCGCCATCGTGGACGAGCTGGCGGAC CTGATGATGACCGCGCCCCGTGACGTCGAGGACGCGATCGTGCGCATCACCCAGAAGGCGCGCGCGGCGGGCATCCACCT GGTGCTGGCCACCCAGCGCCCCTCGGTGGACGTGGTGACCGGCCTCATCAAGACGAACGTGCCTTCCCGGCTGGCGTTCG CGACCTCCTCGCTCACCGACTCGCGCGTCATCCTGGACCAGCCCGGCGCGGAGAAGTTGATCGGCATGGGCGACGGCCTG TTCCTGCCGATGGGCGCGAGCAAGCCCACCCGTCTGCAGGGCGCCTTCATCAGCGACGAGGAGATCCACGCCGTCGTCGA GTTCACCAAGAACCAGGCCGAGCCCGAGTACCAGGAGGGCGTCACCGCGGCCAAGGCGGGGGAGAAGAAGGACGTCGACC CCGACATCGGCGACGACCTCGACCTGCTGCTCCAGGCCGTGGAATTGGTGGTCACCTCGCAGTTCGGTTCCACCTCGATG CTGCAACGCAAACTGCGGGTGGGCTTCGCCAAAGCCGGTCGGCTGATGGACCTCATGGAGACCCGCGGCGTGGTCGGCCC CAGCGAGGGCTCCAAGGCGCGCGACGTGCTGGTCAAGCCGGACGAACTCGACGGGCTGCTCTACTCCATCCGCGGCGGCG GCCCCGCCGAGGGCGCGGACGGCGAATAG
Upstream 100 bases:
>100_bases CGTTCTCCACCCGGCCGTCCCGTGATGTTCATCCCGATGAGGTGGGCGGTACTGGTGTTGCGGATGGTCTCGATGGGGCG ATTGCGGCTAGCCTGGGGGC
Downstream 100 bases:
>100_bases CCGCTCACCACAGGTCCCCCGGGTGCGCCAGCGCGTCCAGCACCAGTGCGGCCCCCGCCACGGCGAACAGGACGCGCACC GACGGTGGCCCGAACCGGGT
Product: putative cell division protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 862; Mature: 861
Protein sequence:
>862_residues MAGKSRSTTTSRARAGSARGRTTAARSRTPRASGTPRAGAAPRARATPARKPARRRSDTAPLAVLGRGISGGWTMLARGI GATTRTLSRAGEIEHGHRRDGIALALLGLSGVIAAAVWLSAGGPIGRWVEGVIRAISGSASAALPFVATGIAIVLMRTEP RPEIRPRLVLGGLLIGLPALGVWHLAAGAPTDAAGRAHAAGFVGYVLGGPLADGLTAWLAVPILVLAIVFGVLLVTGTTV REVPARLREIFGTASGGDEYGDYDGGFDPIGYDADGFPLHHGRSRRRGRTPEENYPPDEFAGSDAVTEVLGDTLPGEPPL RDPKPIAASPPAEPPKPKKRPAPPVADQTPPPPPEPEFVADRVIEGDYTLPPMNLLTDGDPPKKRSAANESMIEAITEVL VQFKIDAAVTGFVRGPTVTRYEVELGPGVKVEKITALARNIAYAVATENVRLLAPIPGKSAVGIEVPNADRELVRLADVL KAPSTRNDHHPLVIGLGKNIEGEFVSANLAKMPHLLVAGSTGSGKSSFVNSMLVSLLQRATPDEVRMILIDPKMVELTPY EGIPHLITPIITQPKKAAAALAWLVEEMEQRYQDMQANKVRHIDDFNKKVKSGAITAPLGSERVYRPYPYILAIVDELAD LMMTAPRDVEDAIVRITQKARAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQPGAEKLIGMGDGL FLPMGASKPTRLQGAFISDEEIHAVVEFTKNQAEPEYQEGVTAAKAGEKKDVDPDIGDDLDLLLQAVELVVTSQFGSTSM LQRKLRVGFAKAGRLMDLMETRGVVGPSEGSKARDVLVKPDELDGLLYSIRGGGPAEGADGE
Sequences:
>Translated_862_residues MAGKSRSTTTSRARAGSARGRTTAARSRTPRASGTPRAGAAPRARATPARKPARRRSDTAPLAVLGRGISGGWTMLARGI GATTRTLSRAGEIEHGHRRDGIALALLGLSGVIAAAVWLSAGGPIGRWVEGVIRAISGSASAALPFVATGIAIVLMRTEP RPEIRPRLVLGGLLIGLPALGVWHLAAGAPTDAAGRAHAAGFVGYVLGGPLADGLTAWLAVPILVLAIVFGVLLVTGTTV REVPARLREIFGTASGGDEYGDYDGGFDPIGYDADGFPLHHGRSRRRGRTPEENYPPDEFAGSDAVTEVLGDTLPGEPPL RDPKPIAASPPAEPPKPKKRPAPPVADQTPPPPPEPEFVADRVIEGDYTLPPMNLLTDGDPPKKRSAANESMIEAITEVL VQFKIDAAVTGFVRGPTVTRYEVELGPGVKVEKITALARNIAYAVATENVRLLAPIPGKSAVGIEVPNADRELVRLADVL KAPSTRNDHHPLVIGLGKNIEGEFVSANLAKMPHLLVAGSTGSGKSSFVNSMLVSLLQRATPDEVRMILIDPKMVELTPY EGIPHLITPIITQPKKAAAALAWLVEEMEQRYQDMQANKVRHIDDFNKKVKSGAITAPLGSERVYRPYPYILAIVDELAD LMMTAPRDVEDAIVRITQKARAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQPGAEKLIGMGDGL FLPMGASKPTRLQGAFISDEEIHAVVEFTKNQAEPEYQEGVTAAKAGEKKDVDPDIGDDLDLLLQAVELVVTSQFGSTSM LQRKLRVGFAKAGRLMDLMETRGVVGPSEGSKARDVLVKPDELDGLLYSIRGGGPAEGADGE >Mature_861_residues AGKSRSTTTSRARAGSARGRTTAARSRTPRASGTPRAGAAPRARATPARKPARRRSDTAPLAVLGRGISGGWTMLARGIG ATTRTLSRAGEIEHGHRRDGIALALLGLSGVIAAAVWLSAGGPIGRWVEGVIRAISGSASAALPFVATGIAIVLMRTEPR PEIRPRLVLGGLLIGLPALGVWHLAAGAPTDAAGRAHAAGFVGYVLGGPLADGLTAWLAVPILVLAIVFGVLLVTGTTVR EVPARLREIFGTASGGDEYGDYDGGFDPIGYDADGFPLHHGRSRRRGRTPEENYPPDEFAGSDAVTEVLGDTLPGEPPLR DPKPIAASPPAEPPKPKKRPAPPVADQTPPPPPEPEFVADRVIEGDYTLPPMNLLTDGDPPKKRSAANESMIEAITEVLV QFKIDAAVTGFVRGPTVTRYEVELGPGVKVEKITALARNIAYAVATENVRLLAPIPGKSAVGIEVPNADRELVRLADVLK APSTRNDHHPLVIGLGKNIEGEFVSANLAKMPHLLVAGSTGSGKSSFVNSMLVSLLQRATPDEVRMILIDPKMVELTPYE GIPHLITPIITQPKKAAAALAWLVEEMEQRYQDMQANKVRHIDDFNKKVKSGAITAPLGSERVYRPYPYILAIVDELADL MMTAPRDVEDAIVRITQKARAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQPGAEKLIGMGDGLF LPMGASKPTRLQGAFISDEEIHAVVEFTKNQAEPEYQEGVTAAKAGEKKDVDPDIGDDLDLLLQAVELVVTSQFGSTSML QRKLRVGFAKAGRLMDLMETRGVVGPSEGSKARDVLVKPDELDGLLYSIRGGGPAEGADGE
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=489, Percent_Identity=46.2167689161554, Blast_Score=414, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 91251; Mature: 91120
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKSRSTTTSRARAGSARGRTTAARSRTPRASGTPRAGAAPRARATPARKPARRRSDTA CCCCCCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PLAVLGRGISGGWTMLARGIGATTRTLSRAGEIEHGHRRDGIALALLGLSGVIAAAVWLS CHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH AGGPIGRWVEGVIRAISGSASAALPFVATGIAIVLMRTEPRPEIRPRLVLGGLLIGLPAL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH GVWHLAAGAPTDAAGRAHAAGFVGYVLGGPLADGLTAWLAVPILVLAIVFGVLLVTGTTV HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH REVPARLREIFGTASGGDEYGDYDGGFDPIGYDADGFPLHHGRSRRRGRTPEENYPPDEF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHH AGSDAVTEVLGDTLPGEPPLRDPKPIAASPPAEPPKPKKRPAPPVADQTPPPPPEPEFVA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DRVIEGDYTLPPMNLLTDGDPPKKRSAANESMIEAITEVLVQFKIDAAVTGFVRGPTVTR HHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEE YEVELGPGVKVEKITALARNIAYAVATENVRLLAPIPGKSAVGIEVPNADRELVRLADVL EEEECCCCCCHHHHHHHHHHHHHEEEECCEEEEEECCCCCEEEEECCCCHHHHHHHHHHH KAPSTRNDHHPLVIGLGKNIEGEFVSANLAKMPHLLVAGSTGSGKSSFVNSMLVSLLQRA HCCCCCCCCCCEEEECCCCCCCCEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHC TPDEVRMILIDPKMVELTPYEGIPHLITPIITQPKKAAAALAWLVEEMEQRYQDMQANKV CCCCEEEEEECCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHIDDFNKKVKSGAITAPLGSERVYRPYPYILAIVDELADLMMTAPRDVEDAIVRITQKA HHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQPGAEKLIGMGDGL HHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCE FLPMGASKPTRLQGAFISDEEIHAVVEFTKNQAEPEYQEGVTAAKAGEKKDVDPDIGDDL EEECCCCCCCEECEEECCCHHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCCCCCCCCH DLLLQAVELVVTSQFGSTSMLQRKLRVGFAKAGRLMDLMETRGVVGPSEGSKARDVLVKP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC DELDGLLYSIRGGGPAEGADGE CCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure AGKSRSTTTSRARAGSARGRTTAARSRTPRASGTPRAGAAPRARATPARKPARRRSDTA CCCCCCCCHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC PLAVLGRGISGGWTMLARGIGATTRTLSRAGEIEHGHRRDGIALALLGLSGVIAAAVWLS CHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH AGGPIGRWVEGVIRAISGSASAALPFVATGIAIVLMRTEPRPEIRPRLVLGGLLIGLPAL CCCCHHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH GVWHLAAGAPTDAAGRAHAAGFVGYVLGGPLADGLTAWLAVPILVLAIVFGVLLVTGTTV HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH REVPARLREIFGTASGGDEYGDYDGGFDPIGYDADGFPLHHGRSRRRGRTPEENYPPDEF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHH AGSDAVTEVLGDTLPGEPPLRDPKPIAASPPAEPPKPKKRPAPPVADQTPPPPPEPEFVA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH DRVIEGDYTLPPMNLLTDGDPPKKRSAANESMIEAITEVLVQFKIDAAVTGFVRGPTVTR HHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEE YEVELGPGVKVEKITALARNIAYAVATENVRLLAPIPGKSAVGIEVPNADRELVRLADVL EEEECCCCCCHHHHHHHHHHHHHEEEECCEEEEEECCCCCEEEEECCCCHHHHHHHHHHH KAPSTRNDHHPLVIGLGKNIEGEFVSANLAKMPHLLVAGSTGSGKSSFVNSMLVSLLQRA HCCCCCCCCCCEEEECCCCCCCCEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHC TPDEVRMILIDPKMVELTPYEGIPHLITPIITQPKKAAAALAWLVEEMEQRYQDMQANKV CCCCEEEEEECCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RHIDDFNKKVKSGAITAPLGSERVYRPYPYILAIVDELADLMMTAPRDVEDAIVRITQKA HHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RAAGIHLVLATQRPSVDVVTGLIKTNVPSRLAFATSSLTDSRVILDQPGAEKLIGMGDGL HHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCE FLPMGASKPTRLQGAFISDEEIHAVVEFTKNQAEPEYQEGVTAAKAGEKKDVDPDIGDDL EEECCCCCCCEECEEECCCHHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCCCCCCCCCCH DLLLQAVELVVTSQFGSTSMLQRKLRVGFAKAGRLMDLMETRGVVGPSEGSKARDVLVKP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC DELDGLLYSIRGGGPAEGADGE CCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]