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The map label for this gene is 54025825

Identifier: 54025825

GI number: 54025825

Start: 4071323

End: 4072150

Strand: Reverse

Name: 54025825

Synonym: nfa38550

Alternate gene names: NA

Gene position: 4072150-4071323 (Counterclockwise)

Preceding gene: 54025826

Following gene: 54025824

Centisome position: 67.63

GC content: 68.72

Gene sequence:

>828_bases
ATGGCTAATCCGTTCGTCAAGGCCTGGAAGTACCTGATGGCCCTCTTCGACTCCAAGATCGAGGAGCACGCGGATCCGAA
GGTGCAGATCCAGCAGGCTATCGAGGAAGCCCAGCGCCAGCACCAGGCCCTCTCGCAGCAGGCCGCGTCGGTCATCGGCA
ACCAGCGCCAGCTGGAGATGAAGCTCAACCGGCAGCTCGACGAGGTCGAGAAGCTCAACGCCAACGCCCGCCAGGCCGTC
ATGCTCGCCGACCAGGCCAGCGCCGCGGGCGACACCGAGAAGGCGATCCAGTACACCAACGCCGCCGAGGCGTTCGCCGC
GCAGCTGGTCACCGCCGAGCAGGCCGTCGAGGACCTCAAGGTGCTGCACGACCAGTCGCTGCAGGCCGCCGCCCAGGCCA
AGAAGGCGGTGGAGCAGAACGCGATGCTGCTGCAGCAGAAGGTCGCCGAGCGCACCAAGCTGCTCAGCCAGCTCGAGCAG
GCCAAGATGCAGGAGCAGGTCTCGGCCTCGCTGCAGCAGATGGACTCCACACTGTCGGCGCCCGGCAGCACGCCCAGCCT
GGACGCGGTCCGCGAGAAGATCGAGCGCCGCTACGCCAATGCCCTCGGCGCCGCCGAGCTGGCCCAGAACTCGGTGCAGG
GCCGGATGATGGAGGTCCAGCAGGCCAGCGTGCAGATGGCCGGCCACAGCAGGCTCGAGCAGATCCGCGCCTCCATGCGT
GGCGAGTCGCTGCCCGCCGGTGGCGCCAACCCCGCGATCAATCCCGCCCAGGCCGACCCGGCGCAGGCCCAGCCCCAGAT
GAACAAGGGCCAGACCGCCCAGCAGTGA

Upstream 100 bases:

>100_bases
TCCAGGTGCCGCATCGTGGAGGATAAGGACAACCGGGTGCGCGAGGGTCGCGTGCCCTGGCCGCGTCAAGCGGTACATCA
GATGGAGGCGGGATCAATCG

Downstream 100 bases:

>100_bases
GACCCGCGATCCGGTGAGCCGTCGGTGCCCTCGGTCGCGACAGGTGTGAGGAAACAGATGAGCCGCAAGCGAATTCCCGC
CGCGTCCGCGCCCGCACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MANPFVKAWKYLMALFDSKIEEHADPKVQIQQAIEEAQRQHQALSQQAASVIGNQRQLEMKLNRQLDEVEKLNANARQAV
MLADQASAAGDTEKAIQYTNAAEAFAAQLVTAEQAVEDLKVLHDQSLQAAAQAKKAVEQNAMLLQQKVAERTKLLSQLEQ
AKMQEQVSASLQQMDSTLSAPGSTPSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASMR
GESLPAGGANPAINPAQADPAQAQPQMNKGQTAQQ

Sequences:

>Translated_275_residues
MANPFVKAWKYLMALFDSKIEEHADPKVQIQQAIEEAQRQHQALSQQAASVIGNQRQLEMKLNRQLDEVEKLNANARQAV
MLADQASAAGDTEKAIQYTNAAEAFAAQLVTAEQAVEDLKVLHDQSLQAAAQAKKAVEQNAMLLQQKVAERTKLLSQLEQ
AKMQEQVSASLQQMDSTLSAPGSTPSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASMR
GESLPAGGANPAINPAQADPAQAQPQMNKGQTAQQ
>Mature_274_residues
ANPFVKAWKYLMALFDSKIEEHADPKVQIQQAIEEAQRQHQALSQQAASVIGNQRQLEMKLNRQLDEVEKLNANARQAVM
LADQASAAGDTEKAIQYTNAAEAFAAQLVTAEQAVEDLKVLHDQSLQAAAQAKKAVEQNAMLLQQKVAERTKLLSQLEQA
KMQEQVSASLQQMDSTLSAPGSTPSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASMRG
ESLPAGGANPAINPAQADPAQAQPQMNKGQTAQQ

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 29906; Mature: 29775

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPFVKAWKYLMALFDSKIEEHADPKVQIQQAIEEAQRQHQALSQQAASVIGNQRQLEM
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KLNRQLDEVEKLNANARQAVMLADQASAAGDTEKAIQYTNAAEAFAAQLVTAEQAVEDLK
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLHDQSLQAAAQAKKAVEQNAMLLQQKVAERTKLLSQLEQAKMQEQVSASLQQMDSTLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGSTPSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASMR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GESLPAGGANPAINPAQADPAQAQPQMNKGQTAQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ANPFVKAWKYLMALFDSKIEEHADPKVQIQQAIEEAQRQHQALSQQAASVIGNQRQLEM
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KLNRQLDEVEKLNANARQAVMLADQASAAGDTEKAIQYTNAAEAFAAQLVTAEQAVEDLK
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLHDQSLQAAAQAKKAVEQNAMLLQQKVAERTKLLSQLEQAKMQEQVSASLQQMDSTLSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGSTPSLDAVREKIERRYANALGAAELAQNSVQGRMMEVQQASVQMAGHSRLEQIRASMR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GESLPAGGANPAINPAQADPAQAQPQMNKGQTAQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2119046 [H]