| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025816
Identifier: 54025816
GI number: 54025816
Start: 4064825
End: 4065292
Strand: Reverse
Name: 54025816
Synonym: nfa38460
Alternate gene names: NA
Gene position: 4065292-4064825 (Counterclockwise)
Preceding gene: 54025818
Following gene: 54025815
Centisome position: 67.52
GC content: 70.3
Gene sequence:
>468_bases ATGTCCATGACCGCGGCGACCGCTCCGGTGCTCACCACCGGACACATCGGGCTGAACGTCTCAGATCTCGACCGCTCGGC CGAGTTCTATTGCCGTGCCCTGGGTTTCGAGCAGATCGCGGCCGGGGGAGAGGGTGACACCCGCTTCGCCTTCCTCGGGC GGGACGGTGCGCTGGTGCTGACCCTCTGGGCCCAGTCCGACGGTACGTTCTCCGCGCGCACGCCCGGCCTGCACCACCTG TCGTTCCAGGTCGGCGACATGGACCGGGTGCGCGCGATCGAACGCACGCTGCGAGAACTGGGAGTCGCGTTGGTGCACGA CGGGGTGGTGGCGCACGGCGAGGGCACGGCCTCGGGCGGCATCTTCTTCACCGATCCCGACGGCATCCGGCTCGAGGTGT ACGCACCCAGCGGCGCCGAGAGCGCGCCCGCACCCAGCGGTGCGGCGCCCACCTGCGGCTTCTTCTGA
Upstream 100 bases:
>100_bases CTAACCGCTTAAATTATTTTAAGGGGTTGACCGTGTTGTGCCCCTCCGGCTACCGTTCTAACCACTGAAACCGTAAAAGA CGGTTAATGATTCCAGGAGG
Downstream 100 bases:
>100_bases GGCTGCGCATCATGACGCCCTTCCATCCCGGCGAACTCGCCGTACAGCGGCGGCTGGGGCAGGACGGCATCGCGGCGAAG GTCGGCCGGACCATCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVLTLWAQSDGTFSARTPGLHHL SFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGGIFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF
Sequences:
>Translated_155_residues MSMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVLTLWAQSDGTFSARTPGLHHL SFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGGIFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF >Mature_154_residues SMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVLTLWAQSDGTFSARTPGLHHLS FQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGGIFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16128; Mature: 15997
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVL CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCEEEE TLWAQSDGTFSARTPGLHHLSFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGG EEEECCCCCEECCCCCEEEEEEEECCHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCC IFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVL CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCEEEE TLWAQSDGTFSARTPGLHHLSFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGG EEEECCCCCEECCCCCEEEEEEEECCHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCC IFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA