Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025816

Identifier: 54025816

GI number: 54025816

Start: 4064825

End: 4065292

Strand: Reverse

Name: 54025816

Synonym: nfa38460

Alternate gene names: NA

Gene position: 4065292-4064825 (Counterclockwise)

Preceding gene: 54025818

Following gene: 54025815

Centisome position: 67.52

GC content: 70.3

Gene sequence:

>468_bases
ATGTCCATGACCGCGGCGACCGCTCCGGTGCTCACCACCGGACACATCGGGCTGAACGTCTCAGATCTCGACCGCTCGGC
CGAGTTCTATTGCCGTGCCCTGGGTTTCGAGCAGATCGCGGCCGGGGGAGAGGGTGACACCCGCTTCGCCTTCCTCGGGC
GGGACGGTGCGCTGGTGCTGACCCTCTGGGCCCAGTCCGACGGTACGTTCTCCGCGCGCACGCCCGGCCTGCACCACCTG
TCGTTCCAGGTCGGCGACATGGACCGGGTGCGCGCGATCGAACGCACGCTGCGAGAACTGGGAGTCGCGTTGGTGCACGA
CGGGGTGGTGGCGCACGGCGAGGGCACGGCCTCGGGCGGCATCTTCTTCACCGATCCCGACGGCATCCGGCTCGAGGTGT
ACGCACCCAGCGGCGCCGAGAGCGCGCCCGCACCCAGCGGTGCGGCGCCCACCTGCGGCTTCTTCTGA

Upstream 100 bases:

>100_bases
CTAACCGCTTAAATTATTTTAAGGGGTTGACCGTGTTGTGCCCCTCCGGCTACCGTTCTAACCACTGAAACCGTAAAAGA
CGGTTAATGATTCCAGGAGG

Downstream 100 bases:

>100_bases
GGCTGCGCATCATGACGCCCTTCCATCCCGGCGAACTCGCCGTACAGCGGCGGCTGGGGCAGGACGGCATCGCGGCGAAG
GTCGGCCGGACCATCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glyoxalase/Bleomycin Resistance Protein/Dioxygenase

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVLTLWAQSDGTFSARTPGLHHL
SFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGGIFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF

Sequences:

>Translated_155_residues
MSMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVLTLWAQSDGTFSARTPGLHHL
SFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGGIFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF
>Mature_154_residues
SMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVLTLWAQSDGTFSARTPGLHHLS
FQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGGIFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16128; Mature: 15997

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00934 GLYOXALASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVL
CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCEEEE
TLWAQSDGTFSARTPGLHHLSFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGG
EEEECCCCCEECCCCCEEEEEEEECCHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCC
IFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMTAATAPVLTTGHIGLNVSDLDRSAEFYCRALGFEQIAAGGEGDTRFAFLGRDGALVL
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCEEEE
TLWAQSDGTFSARTPGLHHLSFQVGDMDRVRAIERTLRELGVALVHDGVVAHGEGTASGG
EEEECCCCCEECCCCCEEEEEEEECCHHHHHHHHHHHHHHCCEEECCCEEEECCCCCCCC
IFFTDPDGIRLEVYAPSGAESAPAPSGAAPTCGFF
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA