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The map label for this gene is 54025734

Identifier: 54025734

GI number: 54025734

Start: 3981702

End: 3982448

Strand: Reverse

Name: 54025734

Synonym: nfa37640

Alternate gene names: NA

Gene position: 3982448-3981702 (Counterclockwise)

Preceding gene: 54025737

Following gene: 54025733

Centisome position: 66.14

GC content: 73.23

Gene sequence:

>747_bases
GTGCGTCAGGACAGCCCCGACGAGGCCCGGCAGCTGCTGGCCCTGCTGTGGCGGCACCGCATGCCCGGCCGCCCCACCAC
CCGCGGCCCCAAGCCCACGGTCACCGTCGACGAGGTGATCGCCGCCGCCGTCGCCCTGGCCGACCGCGAGGGCTACGACA
AGGTCTCCATCCGCGCCATCGCCGCCGATCTCGGGCTCCGGCCGATGAGCGTGTACACCTACGTGCCGAGCAAGGAGGCG
CTGACCGTCCTCATGGTCGACGCCGTCGCCGCACAGGATCCACCCATTCCGGCCGAGCTGCCGGTGCGGGCCAGGATGGC
CGCGATCGCCGATCTGGTGCGCGCGGAGATCCTCGCGCACCCGTGGCTGCTCGAGGTGCCGCCGTGGCGGCTGGTGCTCG
GCCCGGGGCGGCTGCGGCGCTACGAACGCCAGCTCGCCGCCATCGACGGGATCGGACTGTCGGATACGGAGATGGATCGG
GTGATCGCGGTGCTCACCGATTTCGCCACCGGCAACGCGCGCCTCGCGGTCGCCGCGGCCCGGGAGACCAGCGAACTCAG
CGACGAGCAGTGGTGGCAGCGCTTCGGCCCGGAGCTGACGCGGGTGATGCCCGTCGCGGAGTTCCCGCTCTCGGCGCGGG
TGGGCGCGGCTGTCGGCGAGCAGTATCAGGCGCCCGCCGACCCGGACGGGGCCTACGCGTTCGGCCTGGCCAAGCTCGTC
GACGGCATCCTCGCCGATCTGGAGTGA

Upstream 100 bases:

>100_bases
GCGGGCAGAACAGCCTCCCGGAGGGATCGTCGGAGCAGCGGGTACCCTGGACAACGTACACCGTACGGCTTTTGTTCCCG
AACCGCTCCCGAGGAGACCC

Downstream 100 bases:

>100_bases
TAGCCGTGCACCGGACATGGTGACGCGCATCACATTTCGTGCGGGCCGTCGGAAACCGCCTGGCCCGGAAGCCACGACAG
CGGGCGACCGGAGTCGCCCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Regulatory Protein TetR; Tetracyclin Repressor Domain-Containing Protein; Regulatory Protein; Tetr Family Transcriptional Regulator; Transcriptional Regulator GntR Family; Regulator; TetR Family Regulator; TetR-Family Transcriptional Regulator; TetR-Family Regulatory Protein; Regulator Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRQDSPDEARQLLALLWRHRMPGRPTTRGPKPTVTVDEVIAAAVALADREGYDKVSIRAIAADLGLRPMSVYTYVPSKEA
LTVLMVDAVAAQDPPIPAELPVRARMAAIADLVRAEILAHPWLLEVPPWRLVLGPGRLRRYERQLAAIDGIGLSDTEMDR
VIAVLTDFATGNARLAVAAARETSELSDEQWWQRFGPELTRVMPVAEFPLSARVGAAVGEQYQAPADPDGAYAFGLAKLV
DGILADLE

Sequences:

>Translated_248_residues
MRQDSPDEARQLLALLWRHRMPGRPTTRGPKPTVTVDEVIAAAVALADREGYDKVSIRAIAADLGLRPMSVYTYVPSKEA
LTVLMVDAVAAQDPPIPAELPVRARMAAIADLVRAEILAHPWLLEVPPWRLVLGPGRLRRYERQLAAIDGIGLSDTEMDR
VIAVLTDFATGNARLAVAAARETSELSDEQWWQRFGPELTRVMPVAEFPLSARVGAAVGEQYQAPADPDGAYAFGLAKLV
DGILADLE
>Mature_248_residues
MRQDSPDEARQLLALLWRHRMPGRPTTRGPKPTVTVDEVIAAAVALADREGYDKVSIRAIAADLGLRPMSVYTYVPSKEA
LTVLMVDAVAAQDPPIPAELPVRARMAAIADLVRAEILAHPWLLEVPPWRLVLGPGRLRRYERQLAAIDGIGLSDTEMDR
VIAVLTDFATGNARLAVAAARETSELSDEQWWQRFGPELTRVMPVAEFPLSARVGAAVGEQYQAPADPDGAYAFGLAKLV
DGILADLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27022; Mature: 27022

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQDSPDEARQLLALLWRHRMPGRPTTRGPKPTVTVDEVIAAAVALADREGYDKVSIRAI
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHH
AADLGLRPMSVYTYVPSKEALTVLMVDAVAAQDPPIPAELPVRARMAAIADLVRAEILAH
HHHCCCCCEEEEEECCCCHHHHHHEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PWLLEVPPWRLVLGPGRLRRYERQLAAIDGIGLSDTEMDRVIAVLTDFATGNARLAVAAA
CCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC
RETSELSDEQWWQRFGPELTRVMPVAEFPLSARVGAAVGEQYQAPADPDGAYAFGLAKLV
CCHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
DGILADLE
HHHHHCCC
>Mature Secondary Structure
MRQDSPDEARQLLALLWRHRMPGRPTTRGPKPTVTVDEVIAAAVALADREGYDKVSIRAI
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHH
AADLGLRPMSVYTYVPSKEALTVLMVDAVAAQDPPIPAELPVRARMAAIADLVRAEILAH
HHHCCCCCEEEEEECCCCHHHHHHEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PWLLEVPPWRLVLGPGRLRRYERQLAAIDGIGLSDTEMDRVIAVLTDFATGNARLAVAAA
CCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEC
RETSELSDEQWWQRFGPELTRVMPVAEFPLSARVGAAVGEQYQAPADPDGAYAFGLAKLV
CCHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
DGILADLE
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA