| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is suhB [H]
Identifier: 54025727
GI number: 54025727
Start: 3974486
End: 3975412
Strand: Reverse
Name: suhB [H]
Synonym: nfa37570
Alternate gene names: 54025727
Gene position: 3975412-3974486 (Counterclockwise)
Preceding gene: 54025731
Following gene: 54025725
Centisome position: 66.02
GC content: 76.38
Gene sequence:
>927_bases GTGCCGCACTCGAGAATGTCAGCAGCCGAACCCACCGCCGCATCTCCCGCATCCCCCACAGCCGCCGAATCCCCCGCAGC CGTCGCCGAGCTGCGCCGCACGGCCGTCGAACTCGCCGAACGCGCCGCCGACCATGTGCGCGCCCGCCGCCCCGAGGTGT TCGGCCCGGACGGCGAGGCCGCCGACGCGGTGCGGACCAAGGGCCACGCCACCGACCCGGTCACCGTGGTCGACACCGAG ACCGAGGAACTGATCCGCGGCCTGCTGGCCCGGCATCGCCCCGGCGAAGCCGTGCTGGGCGAGGAGGGCGGCGGCAGCCT GGGCGCCGACGACGGCGCGGTGCACTGGGTCGTCGACCCGATCGACGGCACCGTCAATTTCCTCTACGGCATCCCCGGCT ACGCCGTCTCGGTGGCGGCGATGCGGGGTGGCCGGTCCGTCGCGGGCGCGGTCGTCGACGTCGCCCGGCAGGTCACCTAC AGCGCCGGGCTCGGGGCGGGCGCGCACGCGCACACCGCCGGCGGCCCGGCCGAACGGTTGCACTGCTCGGCCGCGGCCTC GCTGGACCTGGCGCTGGTCGCCACCGGTTTCGCCTACGGCAGACACCGGCGGACGCGGCAGGCCGAGATCATCGCCCGGG TGCTGCCGCAGGTGCGCGACATCCGCCGCTTCGGCGCCGCCGCGCTCGACCTGTGCCACGTGGCCGCGGGCCGGGTCGAC GCCTACTTCGAGCACGGGCTCAACGCCTGGGATTGGGGCGCTGGCGCGCTGATCGCCGCCGAAGCCGGTGCGGTGCTGAC GCTGCCGGCCGCCCACCGGTCCGGCGCCGAGGGCGACCTCGTGGTGGCCGCCGCCCCCGGTATCGCCGAGGAACTCGCCG GGGTGCTGCGCGCGGCGGGCGCCACCGATCCGATCCCGGACCGCTGA
Upstream 100 bases:
>100_bases GCCGCGTCCGGTGTCGTGCCGCACAAGGGTAAGCGTGCGCCGTGGCGACCGCGGCGGCGGGACCTGTGCTGCCGGGGACG ATCTGTGATGCCATGGAGAC
Downstream 100 bases:
>100_bases CAGCGCCGAGGCCGCGCCCCCGGCGGGAGCGCGGCCTCGGGAATCGGGGTGTCAGCAGCGCGCGGTGCGCGCGGCCTCCA GCAGATCGATATCGATCTTC
Product: putative monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPHSRMSAAEPTAASPASPTAAESPAAVAELRRTAVELAERAADHVRARRPEVFGPDGEAADAVRTKGHATDPVTVVDTE TEELIRGLLARHRPGEAVLGEEGGGSLGADDGAVHWVVDPIDGTVNFLYGIPGYAVSVAAMRGGRSVAGAVVDVARQVTY SAGLGAGAHAHTAGGPAERLHCSAAASLDLALVATGFAYGRHRRTRQAEIIARVLPQVRDIRRFGAAALDLCHVAAGRVD AYFEHGLNAWDWGAGALIAAEAGAVLTLPAAHRSGAEGDLVVAAAPGIAEELAGVLRAAGATDPIPDR
Sequences:
>Translated_308_residues MPHSRMSAAEPTAASPASPTAAESPAAVAELRRTAVELAERAADHVRARRPEVFGPDGEAADAVRTKGHATDPVTVVDTE TEELIRGLLARHRPGEAVLGEEGGGSLGADDGAVHWVVDPIDGTVNFLYGIPGYAVSVAAMRGGRSVAGAVVDVARQVTY SAGLGAGAHAHTAGGPAERLHCSAAASLDLALVATGFAYGRHRRTRQAEIIARVLPQVRDIRRFGAAALDLCHVAAGRVD AYFEHGLNAWDWGAGALIAAEAGAVLTLPAAHRSGAEGDLVVAAAPGIAEELAGVLRAAGATDPIPDR >Mature_307_residues PHSRMSAAEPTAASPASPTAAESPAAVAELRRTAVELAERAADHVRARRPEVFGPDGEAADAVRTKGHATDPVTVVDTET EELIRGLLARHRPGEAVLGEEGGGSLGADDGAVHWVVDPIDGTVNFLYGIPGYAVSVAAMRGGRSVAGAVVDVARQVTYS AGLGAGAHAHTAGGPAERLHCSAAASLDLALVATGFAYGRHRRTRQAEIIARVLPQVRDIRRFGAAALDLCHVAAGRVDA YFEHGLNAWDWGAGALIAAEAGAVLTLPAAHRSGAEGDLVVAAAPGIAEELAGVLRAAGATDPIPDR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=243, Percent_Identity=32.0987654320988, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI5031789, Length=215, Percent_Identity=29.7674418604651, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI221625487, Length=215, Percent_Identity=29.7674418604651, Blast_Score=96, Evalue=4e-20, Organism=Escherichia coli, GI1788882, Length=257, Percent_Identity=35.408560311284, Blast_Score=140, Evalue=9e-35, Organism=Caenorhabditis elegans, GI193202570, Length=251, Percent_Identity=33.8645418326693, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI193202572, Length=244, Percent_Identity=32.7868852459016, Blast_Score=94, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6321836, Length=237, Percent_Identity=26.5822784810127, Blast_Score=76, Evalue=7e-15, Organism=Drosophila melanogaster, GI21357303, Length=246, Percent_Identity=31.7073170731707, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI21357329, Length=260, Percent_Identity=30.3846153846154, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24664922, Length=252, Percent_Identity=29.7619047619048, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21357957, Length=247, Percent_Identity=31.1740890688259, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24664926, Length=223, Percent_Identity=32.7354260089686, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24664918, Length=241, Percent_Identity=29.8755186721992, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 31453; Mature: 31322
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSRMSAAEPTAASPASPTAAESPAAVAELRRTAVELAERAADHVRARRPEVFGPDGEA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH ADAVRTKGHATDPVTVVDTETEELIRGLLARHRPGEAVLGEEGGGSLGADDGAVHWVVDP HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEEC IDGTVNFLYGIPGYAVSVAAMRGGRSVAGAVVDVARQVTYSAGLGAGAHAHTAGGPAERL CCCCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH HCSAAASLDLALVATGFAYGRHRRTRQAEIIARVLPQVRDIRRFGAAALDLCHVAAGRVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYFEHGLNAWDWGAGALIAAEAGAVLTLPAAHRSGAEGDLVVAAAPGIAEELAGVLRAAG HHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC ATDPIPDR CCCCCCCC >Mature Secondary Structure PHSRMSAAEPTAASPASPTAAESPAAVAELRRTAVELAERAADHVRARRPEVFGPDGEA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH ADAVRTKGHATDPVTVVDTETEELIRGLLARHRPGEAVLGEEGGGSLGADDGAVHWVVDP HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEEEC IDGTVNFLYGIPGYAVSVAAMRGGRSVAGAVVDVARQVTYSAGLGAGAHAHTAGGPAERL CCCCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH HCSAAASLDLALVATGFAYGRHRRTRQAEIIARVLPQVRDIRRFGAAALDLCHVAAGRVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYFEHGLNAWDWGAGALIAAEAGAVLTLPAAHRSGAEGDLVVAAAPGIAEELAGVLRAAG HHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC ATDPIPDR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]