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The map label for this gene is 54025662

Identifier: 54025662

GI number: 54025662

Start: 3911381

End: 3911734

Strand: Reverse

Name: 54025662

Synonym: nfa36920

Alternate gene names: NA

Gene position: 3911734-3911381 (Counterclockwise)

Preceding gene: 54025664

Following gene: 54025661

Centisome position: 64.97

GC content: 69.49

Gene sequence:

>354_bases
ATGGATTTTCTGTTTCCGCTGCTGCTGGTAGCCCTGCTCGTGCCGATGTTCCTCGGTATCCGCCGCCAGAAGCGCGAGGC
CGAGAAGGTGGCCGCCATGCAGAGCGGCCTGAAGGTCGGCGACCCGGTGGTCACGACCTCGGGGCTGTGGGGAACCGTCG
TCGACCTCGATGACGACACCGTGGACCTGGAGATCGCCGAGGACGTGGTCACCACCTGGCTGCGCAAGGCGATCCTCGAG
GTGCGCACCGTGGACGAGTCCGCGACCGAGGCCGCCGCCGAGCCCGGCGAGGCCCCGGCCGCCGCGGTGGAGGAATCCGC
CGAGCAGCCCGAGACCCGGCTGACCAAGGACTGA

Upstream 100 bases:

>100_bases
GCTCGCCCGGGGGTGTGCGGGTGTGGCGCCCCGGCCCGCAGCTGGCAGACTGTGTGGGTACTTGTCCTTCCCACCCACTA
GACAGGGACTGACTTCGACG

Downstream 100 bases:

>100_bases
CCTCCCTACCGCCGCCGCGGCGGGCCGGACGCGTGCGCGCCCGGCGGCCGCGGTGTGCGTCCGTTCCACCCGCGACTTCC
GCCTAGGAGAGACGAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDFLFPLLLVALLVPMFLGIRRQKREAEKVAAMQSGLKVGDPVVTTSGLWGTVVDLDDDTVDLEIAEDVVTTWLRKAILE
VRTVDESATEAAAEPGEAPAAAVEESAEQPETRLTKD

Sequences:

>Translated_117_residues
MDFLFPLLLVALLVPMFLGIRRQKREAEKVAAMQSGLKVGDPVVTTSGLWGTVVDLDDDTVDLEIAEDVVTTWLRKAILE
VRTVDESATEAAAEPGEAPAAAVEESAEQPETRLTKD
>Mature_117_residues
MDFLFPLLLVALLVPMFLGIRRQKREAEKVAAMQSGLKVGDPVVTTSGLWGTVVDLDDDTVDLEIAEDVVTTWLRKAILE
VRTVDESATEAAAEPGEAPAAAVEESAEQPETRLTKD

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2588c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12680; Mature: 12680

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLFPLLLVALLVPMFLGIRRQKREAEKVAAMQSGLKVGDPVVTTSGLWGTVVDLDDDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCC
VDLEIAEDVVTTWLRKAILEVRTVDESATEAAAEPGEAPAAAVEESAEQPETRLTKD
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDFLFPLLLVALLVPMFLGIRRQKREAEKVAAMQSGLKVGDPVVTTSGLWGTVVDLDDDT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCC
VDLEIAEDVVTTWLRKAILEVRTVDESATEAAAEPGEAPAAAVEESAEQPETRLTKD
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]