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The map label for this gene is ynfA [C]

Identifier: 54025653

GI number: 54025653

Start: 3899197

End: 3899532

Strand: Reverse

Name: ynfA [C]

Synonym: nfa36830

Alternate gene names: 54025653

Gene position: 3899532-3899197 (Counterclockwise)

Preceding gene: 54025655

Following gene: 54025652

Centisome position: 64.76

GC content: 73.51

Gene sequence:

>336_bases
ATGACGGTCCTGCGGTCGCTGGTGTTGTTCGGGCTGGCGGCGCTCGCCGAGATCGGCGGTGCCTGGCTGGTGTGGCAGGG
CTGGCGCGAGCACCGGGGGCTGTGGTGGATCGCGGCCGGGGTGATCGCGCTCGGGGCCTACGGCTTCGTGGCCACCTTCC
AGCCGGACCCGGACTTCGGCCGGGTGCTGGCGGCCTACGGCGGCGTCTTCGTGGTGGGGTCGCTGGCGTGGGGCGTGCTG
GTCGACCGATTCCGGCCGGACCGATGGGATCTGCTCGGCGCGGGCATCTGCCTGGTGGGCGTCGCGGTGATCATGTACGC
CCCGCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
CGGATGGCCGCTTCGGCGCTCGGGCCTGCGCTCGGGCGGTCGTTGCCGGACGGCCGCGGGCGGGGGCGGAGCCGGCGGAC
GGGGCGGTAGCGTGCGACCC

Downstream 100 bases:

>100_bases
GGCGCCCGAGCCCCGCGGTGGCCGGGCAGTTGGGATGCCGAGAATTTGCTGGAGCCGTGCCGCCGGTACGGTCGGCGGTG
ACCGAAACCGCAACGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTVLRSLVLFGLAALAEIGGAWLVWQGWREHRGLWWIAAGVIALGAYGFVATFQPDPDFGRVLAAYGGVFVVGSLAWGVL
VDRFRPDRWDLLGAGICLVGVAVIMYAPRGG

Sequences:

>Translated_111_residues
MTVLRSLVLFGLAALAEIGGAWLVWQGWREHRGLWWIAAGVIALGAYGFVATFQPDPDFGRVLAAYGGVFVVGSLAWGVL
VDRFRPDRWDLLGAGICLVGVAVIMYAPRGG
>Mature_110_residues
TVLRSLVLFGLAALAEIGGAWLVWQGWREHRGLWWIAAGVIALGAYGFVATFQPDPDFGRVLAAYGGVFVVGSLAWGVLV
DRFRPDRWDLLGAGICLVGVAVIMYAPRGG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3683_NOCFA (Q5YTG0)

Other databases:

- EMBL:   AP006618
- RefSeq:   YP_119895.1
- GeneID:   3109166
- GenomeReviews:   AP006618_GR
- KEGG:   nfa:nfa36830
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- ProtClustDB:   PRK02237
- BioCyc:   NFAR247156:NFA36830-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11932; Mature: 11801

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a9e17f8)-; HASH(0x1b411220)-; HASH(0x1b064420)-; HASH(0x1b413c2c)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLRSLVLFGLAALAEIGGAWLVWQGWREHRGLWWIAAGVIALGAYGFVATFQPDPDFG
CHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCHH
RVLAAYGGVFVVGSLAWGVLVDRFRPDRWDLLGAGICLVGVAVIMYAPRGG
HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
TVLRSLVLFGLAALAEIGGAWLVWQGWREHRGLWWIAAGVIALGAYGFVATFQPDPDFG
HHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCHH
RVLAAYGGVFVVGSLAWGVLVDRFRPDRWDLLGAGICLVGVAVIMYAPRGG
HHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA