Click here to switch to the map view.

The map label for this gene is 54025633

Identifier: 54025633

GI number: 54025633

Start: 3878770

End: 3879459

Strand: Reverse

Name: 54025633

Synonym: nfa36630

Alternate gene names: NA

Gene position: 3879459-3878770 (Counterclockwise)

Preceding gene: 54025634

Following gene: 54025632

Centisome position: 64.43

GC content: 74.35

Gene sequence:

>690_bases
ATGCGCACCACGGGTGCGGTGGCGTGTGCGAAGAGGTGGAACGTGGACCCCAACGCGGACCGGGCCGAGCCGGACCGGCC
GGTCGGACTCGATCTCGTCGCGCCGGAGACCTACGTCCCGATGCTGCGCAAGCTCGCGCTGGCGGCGGTGGGCGTCGGCC
TCGGCGCAGGCCTGCTGGCCGCGGTGCTGGTGGCGTGGCCGATCGCGCTGGCGATCGGGCTGGTCGTGGCCGTGCCGACC
GTCTGCTATGCCCTCGCGCTCGGTCGTCGCCGGATCTGGCTCAGCGGCAAGACCGTGCACGCGCGGCTGCTCGTCGGGGA
ACGCCGCCTCGAGGTGGCCGCGGCCTCCGGCGTCGAACTGCTCGTCTTCCCCGGCCGGCTGAGCCGGGTCGCCCTGCGGC
TCACCGAAGGCGGGCAGACCCAGCTCATTCCGCTGGCGATGTACACCGACGGCGGCAGCGGCCGCGAACTGCACCTGCTC
GGCCTGCGCAGGCTCGCCGACGCACTCGCCGCGGGCGAGTCCGCGGCCGCCGTCGCGGTGTCGGATCTGCTGATCCGCCA
GCTGCGCACCGAGGCCCGCGACGCCGGGCTCGAGGAACGGCCGCTCTACCGGGCCGTGCGGCTGGCGCGAGCCAAGGACT
ACGTCTCCCCGGTCGTGCTCACCGACCGCGAGGTCGCCGAACTGACCTGA

Upstream 100 bases:

>100_bases
CTGGGCGAGGTCGTCGGCGTGCTGCGCAGCGAACTCGGATAGGTCCCGAGCGGGCGCACCCGCGGGGTACGGTTGCTGCG
CACCACGGGTGCGGTGGCTG

Downstream 100 bases:

>100_bases
GGGCGGTAGCCGAACGACCCTGGTGTTCCGTAGCTCACCACCGCGGTTCGGCCTCGGTGAACCTCGCTAGGGTGGGCAGC
GAGACGCAGTCGACCCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRTTGAVACAKRWNVDPNADRAEPDRPVGLDLVAPETYVPMLRKLALAAVGVGLGAGLLAAVLVAWPIALAIGLVVAVPT
VCYALALGRRRIWLSGKTVHARLLVGERRLEVAAASGVELLVFPGRLSRVALRLTEGGQTQLIPLAMYTDGGSGRELHLL
GLRRLADALAAGESAAAVAVSDLLIRQLRTEARDAGLEERPLYRAVRLARAKDYVSPVVLTDREVAELT

Sequences:

>Translated_229_residues
MRTTGAVACAKRWNVDPNADRAEPDRPVGLDLVAPETYVPMLRKLALAAVGVGLGAGLLAAVLVAWPIALAIGLVVAVPT
VCYALALGRRRIWLSGKTVHARLLVGERRLEVAAASGVELLVFPGRLSRVALRLTEGGQTQLIPLAMYTDGGSGRELHLL
GLRRLADALAAGESAAAVAVSDLLIRQLRTEARDAGLEERPLYRAVRLARAKDYVSPVVLTDREVAELT
>Mature_229_residues
MRTTGAVACAKRWNVDPNADRAEPDRPVGLDLVAPETYVPMLRKLALAAVGVGLGAGLLAAVLVAWPIALAIGLVVAVPT
VCYALALGRRRIWLSGKTVHARLLVGERRLEVAAASGVELLVFPGRLSRVALRLTEGGQTQLIPLAMYTDGGSGRELHLL
GLRRLADALAAGESAAAVAVSDLLIRQLRTEARDAGLEERPLYRAVRLARAKDYVSPVVLTDREVAELT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24349; Mature: 24349

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTGAVACAKRWNVDPNADRAEPDRPVGLDLVAPETYVPMLRKLALAAVGVGLGAGLLA
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AVLVAWPIALAIGLVVAVPTVCYALALGRRRIWLSGKTVHARLLVGERRLEVAAASGVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEECCHHHEEECCCCCEE
LVFPGRLSRVALRLTEGGQTQLIPLAMYTDGGSGRELHLLGLRRLADALAAGESAAAVAV
EEECCCHHEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCHHHHHH
SDLLIRQLRTEARDAGLEERPLYRAVRLARAKDYVSPVVLTDREVAELT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHCC
>Mature Secondary Structure
MRTTGAVACAKRWNVDPNADRAEPDRPVGLDLVAPETYVPMLRKLALAAVGVGLGAGLLA
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AVLVAWPIALAIGLVVAVPTVCYALALGRRRIWLSGKTVHARLLVGERRLEVAAASGVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEECCHHHEEECCCCCEE
LVFPGRLSRVALRLTEGGQTQLIPLAMYTDGGSGRELHLLGLRRLADALAAGESAAAVAV
EEECCCHHEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCHHHHHH
SDLLIRQLRTEARDAGLEERPLYRAVRLARAKDYVSPVVLTDREVAELT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA